Pectobacterium parmentieri SCC3193: W5S_2484 Help Entry W5S_2484          CDS       T02514                                  Name (GenBank) Pectate disaccharide-lyase   KO K01728   pectate lyase [EC:4.2.2.2] Organism pec  Pectobacterium parmentieri SCC3193 Pathway pec00040   Pentose and glucuronate interconversions pec01100   Metabolic pathways pec02024   Quorum sensing Brite KEGG Orthology (KO) [BR:pec00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     W5S_2484  09140 Cellular Processes   09145 Cellular community - prokaryotes    02024 Quorum sensing     W5S_2484 Enzymes [BR:pec01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      W5S_2484 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_2 Motif Other DBs NCBI-ProteinID:  AFI90572 UniProt:  A0A0H3I3G9 LinkDB All DBs Position 2677116..2678822 Genome browser AA seq 568 aa AA seqDB search MKRFALSLLAGLVALQASAATPDRLTTVNQYVDNVLAKAGDHYHGQSPTPLLADGVDPRT GKQMEWIFPDGRQAVLSNFSAQQNLMRVLVGLSNLSGNPSYKQRAEAIVKYHFQHYQDES GLLIWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDKEATARFIRGFWNAHV YDWKIMETSRHGKYGQKIGALWQSPFEQQPPFFATKGLSFLNAGNDLIYSASLLYKYNKE DGALIWAKRLAQQYVLPRDKATGLGVYQFTQALKRDETTDDADTHSKYGDRAQRQFGPEF GPTALEGNMMLKGRTSTIYSENALMQLQLGKDLGAEGKELLTWTTDGLKAFAKYAYNESD NTFRPMLANGKDLSNYVLPRDGYYGKKGTVLKPYPADNSFLLSYARAYTVSPDTELWRVA RGIARAQGLGELGSAPGKDVKVDLATKNSDPYALFALLDLYQASKVKDYLSLAEKVGDNI ISTRYKNGFFMAEPNRQYADVDTIEPYALLALEAAIRNQPQSVAPFLNGAGFTEGGYRME DGSTRVSTRDNELFLLNVGETLKPNNKK NT seq 1707 nt NT seq  +upstreamnt  +downstreamnt atgaaaagatttgctctgtcgctccttgctggtctggtcgctttacaggccagcgccgcc acaccagaccgtctcaccaccgtcaatcagtatgttgacaacgtgctagcgaaagcgggt gaccattatcacggtcaatcgcccacgccactgcttgctgacggtgtcgatcctcgcact ggcaaacagatggagtggatcttccctgatggtcgtcaggccgtgctgtccaacttctcc gctcagcagaacctgatgcgcgtactggtcgggctcagtaatctgagcggtaatcccagc tataagcagcgtgctgaagcgatagtgaaatatcacttccaacattatcaggatgagagc ggcctgctgatttggggcggccaccgtttcgttgatttaaaaacgctgcaaccggaaggc cccagtgaaaaagagatggtgcatgagttgaaaaatgcctatccctactacgatttgatg ttcagcgtcgataaagaggcgaccgcgcgctttattcgcggcttctggaatgcgcacgtt tatgactggaagatcatggaaaccagccgtcacggtaaatacgggcaaaaaataggcgca ctctggcaaagcccgtttgagcaacagccgcccttcttcgcgaccaagggtcttagcttc ctgaatgccggtaacgatctgatctattccgcttccttactgtataaatacaataaagaa gatggcgcgctgatctgggcaaaacgcctagcgcagcagtatgtgctaccacgggataaa gcaaccggacttggcgtgtatcagtttacgcaggcgctgaagcgcgatgaaaccaccgat gatgccgatacgcattccaaatacggcgatcgcgcccagcgtcaatttggcccagagttc ggcccaacggcactggaaggcaatatgatgctgaaaggacgcaccagcacaatctattcc gaaaatgcgctcatgcaactccaactgggtaaagatttaggcgcggaaggcaaagaatta ctgacgtggacaaccgatggcctcaaggcctttgctaaatatgcctacaacgagtccgat aacaccttccgtccgatgctcgctaacggcaaagatctctccaactacgtcctaccgcgt gacggttactacggtaaaaaaggcaccgtgctcaaaccttatcctgcggataactcattc ttgctctcgtatgctcgcgcctacaccgtttcaccggataccgagctgtggcgtgttgca cgcggcatcgctcgcgcccaagggttgggtgaattaggttcagcaccgggcaaggacgtc aaagtagatctcgcaacaaagaacagtgatccttatgccctgtttgcgctgctggatctg tatcaggctagcaaagtgaaggactatttgtcgctggcggaaaaagtgggcgataacatt atcagtacgcgttataaaaacggcttcttcatggccgagcccaacaggcaatatgctgat gtcgacaccatcgagccttacgcgctgttagcgttggaagccgcgatacgtaatcaaccg cagtccgttgctccgttcctgaatggtgcaggcttcaccgaaggcggttaccgcatggaa gatggttcaacccgcgtgtctacgcgcgataacgaactcttcctgctaaatgttggtgag acattaaagccaaacaacaagaaataa

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