Phycodurus eques (leafy seadragon): 133396178
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Entry
133396178 CDS
T09682
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04510
Focal adhesion
pee04512
ECM-receptor interaction
pee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133396178 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133396178 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133396178 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pee00535
]
133396178 (col9a2)
Proteoglycans [BR:
pee00535
]
Extracellular matrix (ECM) proteoglycans
Others
133396178 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
133396178
NCBI-ProteinID:
XP_061521687
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Position
20:complement(5241565..5256974)
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AA seq
691 aa
AA seq
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MASLSVVLKSWVILQTLCLVLAQVRGPPGPQGQAGPPGSSGTPGSDGIDGDKGPPGPPGP
LGQKGEPGQPGPDGAPGENGIDGLIGAKGDRGAVGTPGPKGRPGLSGEPGRPGPGLPGLA
GAPGPIGLPGEIGPIGPRGLMGPPGPPGLSGPPGKPGPPGKFIGGEEGSADFQCPLNCPA
GPKGPQGLQGVKGHKGRPGALGESGSIGKVGLKGEVGISGEQGIPGPSGPMGVRGYPGMM
GPKGEAGPRGYKGINGPVGIPGPPGEEGPQGPPGEAGDKGDKGSRGIQGPQGVVGKKGDN
GLPGIDGKDGTPGIPGIKGGPGQAGMPGPPGPQGTAGLPGSPGSKGGPGAKGEPGPRGHS
GMPGGPGPLGEPGVPGEAGMAGVPGPKGDRGQRGPVGPQGIVGKPGNKGERGPMGVPGAQ
GLSGTIGDKGFQGKGGPKGDIGDPGVEGLGGEKGEKGLSGEPGPKGQHGVRGDPGHNGPT
GDPGKPGDQGSAGLPGPRGLNGVRGVPGMAGIQGSAGRDASDQHIIEVVLRMLQEKLAAV
AVSAKRAVLGGAGVMGPPGPPGPAGPPGPQGTHGIPGSRGIPGMIGAPGQIGNTGLKGKR
GAKGDRGDPGKPHQGPPGPPGIQGPPGVDGAARDGRPGERGPQGAAGEAGRPGKAGPPGL
PGFCEAAMCLAASAYTSPRLQEAGTIKGPNI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctctcggtcgtgctgaagtcctgggtcatactgcagacactgtgcctagtt
ctggcccaagtgagaggtccacctggacctcagggccaggcgggcccaccaggctcttct
ggcactcctgggtcggacggcattgatggagacaaaggtccacctggccctccaggtcca
ctgggacaaaagggagagccaggacagccaggtcctgatggtgcaccaggagagaacggc
attgatggattgattggtgcaaagggtgaccgaggtgcagtgggaacccctggcccgaag
ggtcggcctgggttaagtggtgagcctggcagacctggacctggtctcccaggacttgct
ggagctccaggacccattgggcttcctggtgaaattgggccaatcggaccaaggggtttg
atgggaccacctggacctccaggactttctgggccaccaggcaagccaggtccgccaggg
aagttcattggtggagaagaagggagtgccgacttccagtgtcctcttaactgtccagca
ggacctaagggcccgcagggacttcaaggagtcaaaggccacaaaggacgtcctggagct
cttggagaatctggcagtattggaaaagtgggactcaaaggagaagtgggcatctctgga
gagcaaggcatcccaggaccttcgggtccaatgggtgtgaggggttatccaggaatgatg
ggtcccaaaggagaggcgggccctcgtggttacaagggcatcaacggacctgtagggatt
cccggacctccaggtgaggagggacctcagggtccacctggagaggcaggagacaaggga
gataaaggcagccgtggtatccaaggccctcagggcgtagttggcaaaaaaggagacaat
ggcctgcctggtattgatggaaaagatggcacacctggtattcctggaatcaaaggtggg
cccggccaagctgggatgccaggtccccctggtcctcagggaacagcgggattgcccggt
agtccaggttccaaaggtggtcctggagctaaaggtgaacctggacccaggggtcattct
ggcatgcccggtggccctggacctctgggtgagcctggtgttcctggtgaggctggtatg
gcaggagttcctggtcccaagggagacagaggtcagcgcggtccagtgggcccccaagga
atagtggggaagcctggaaataaaggagaaagggggccaatgggtgttccaggtgctcag
ggcctgagtggaaccataggagacaagggattccaaggaaaaggtgggccaaagggagac
atcggtgacccaggtgttgaagggttgggtggcgagaaaggcgaaaagggtttgtctgga
gaacctggacctaaaggacagcacggagtgaggggggaccccggacacaatggtccaact
ggagaccctggcaaaccaggtgatcagggatccgctggactgcccggtcccagaggactg
aatggagtgcgaggtgtgcctggcatggcgggcattcagggttcggcaggacgtgatgca
tctgaccaacatattattgaagtagtgctgaggatgttgcaagagaagctagcagcagtg
gctgtgagtgccaagagggctgtgcttgggggcgctggtgtaatgggacccccaggccct
cctggacctgcaggaccacccggtccccagggaacgcatggtatacctggttctaggggc
attcctggcatgattggagctcccgggcagattggaaacacggggctaaaaggaaagaga
ggggctaagggtgacagaggagatcctggaaaaccccaccaaggaccaccaggacccccg
ggaatccaaggtcctcctggtgttgatggtgcggctcgagatggcaggccgggcgagaga
ggccctcagggggcagctggtgaggccggtcgtcccggtaaagcgggtccgccgggcctc
ccaggcttctgcgaggctgcaatgtgcctggccgcgtcggcgtacacctctccgagacta
caggaggcgggaaccatcaaaggacccaacatttag
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