Phycodurus eques (leafy seadragon): 133411110
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Entry
133411110 CDS
T09682
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pee04040
]
133411110 (scn1laa)
Ion channels [BR:
pee04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
133411110 (scn1laa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
133411110
NCBI-ProteinID:
XP_061549017
LinkDB
All DBs
Position
12:15644822..15682346
Genome browser
AA seq
1977 aa
AA seq
DB search
MAQLLVPPGPDSFRRFSCESLAAIEKRIAEENAKKPKGEKRKRKDEDELKPSSDLEAGKS
VPLVYGEVPKGMVSTPVEDLDPYYSNQKTFIVINKGNFIFRFNAAPALYLLSPFNLLRRI
SIWILVHSLFSLVIMCTIITNCVFMTLSRPPDWAKNVEYTFTAIYTFESLVKILARGFCI
GKFTFLRDPWNWLDFSVIVMAYVTEFVNLGSFSALRTFRVLRALKAISVIPGLKTIVGAL
FQSVKKLSDVMILTVFCLSVFALIGLQLFMGHLKQKCVFMPVHNNSPINGTFSNETYMNG
AYNNNQEEAFNWTEYSLDNKNYYYLPGKRDPLLCGNGSEAGQCPEGFSCIKVGRNPNYGY
TSFDSFGWAFLSLFRLMTQDCWENLYQQTLRASGKPYMVFFVLVIFLGSFYLINLILAVV
AMAYEEQSQATIKEAQEKEEEFQAMLEQLKRQQDAQAAAVASAEHGEVSDHGGVMESSSE
TSKLSSKSAKERCNRRRKKKEEGKVPKSESQESIKKSRCRFSVEPNILHYDMKCSSAHQS
FLSIHGHPFSSRRNSRTSIFSFQSQSRDVGSENEFADDENSIFEDNRSRRTSLFFTRGCD
RNSSSISQSSFFPHPLLSPCRMKQSTVDCNGVVSLMGVESIPLSPMGLFRPKLTVDMASN
RDKADTTDTESGTNQECIDFPEDPEARDRTHSVASVITSTMEELEESRQKCPPCWYSFAN
TFLIWQCCPVWLKIKKVVKLIVMDPFTDLTITICIVLNTLFMAMEHYPMTKDFSRTLSVG
NMVFTGIFTAEMVFKIIAMDPYYYFQEGWNIFDGIIVSLSLMELCLSNVVGMSVLRSFRL
LRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKI
SSNCKLPRWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGPTMCIIVYMMVMVIGNLVV
LNLFLALLLSSFSADNLAATEDDSDTNNLQIAIARIHNGIAFVKSLLQSTCNSVCLQSNS
QIQGEDKSSLEDFPKGSAPNGIPNHTIKELPRNGNGDVTGVDKSGDKYIVCSKTDDSIMS
FINNPSLTVNVPIALGESDFENLNTEDFSSVSSDAVECRVTVDDDGQLSTSEGSTADIGD
KDGDSLDFELAESMEPDACFPNSCVQRFQCCQVNVEVGWWKIWWTIRKTCFRIVEHNWFE
SFIIFMILLSSGALAFEDVYIETRKNIKAMLEYADKMFTYIFILEMLLKWVAYGYAKYFT
NAWCWLDFLIVAVSLVSLTANALGFAELGAIKSLRTLRALRPLRALSRFEGMRVVVNALL
GAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYRCVNRTSDEPFLPTQVQNMTRCLALGK
DVARWKNIKINFDNVGLGYLALLQVATFKGWMDIMYAAVDSPSKNEEQPAYEINLKMYLY
FVVFIIFGAFFTLNLFIGVIIDNFNQQKRKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKP
IPRPSNKIQAYIFDITTMQAFDVVIMILIWLNMVAMMVETDDQSDKKKGILSWINGVFIC
VFTGECLLKMIALRQYFFTNGWNVFDFIVVVLSIIGMSLSELIEKYFVSPTLFRVIRLAR
IGRVLRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKESGID
DLFNFETFGNSMICLFQITTSAGWDALLAPILNKYEDDCDSTMEHPGSAVKGDCGSPSVG
IAFFVSYIIICFLIVINMYIAVILENFGVATEESADPLSEDDFEMFYEVWERFDPSATQF
MEYNKLSEFADALDPPLRIAQPNSIELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEM
DMLRAQMEERFMASNPSKMSYEPITTTLRRRQEDTSAVIIQRAFREHLRRQAPDKTFEEA
KDEIPNDEKPVDKEVPVKDKLNEVSGLDIKEPSTYQPSENDNAELDVTGKDGTEHDS
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctgcttgtaccgccaggaccagacagcttccgccgctttagttgcgagtcc
ctcgccgccatcgagaagcggatcgcagaggagaacgccaaaaagccaaagggagagaag
agaaagcgcaaagatgaggatgaactcaagcccagtagcgacttggaggcgggaaagtcc
gtccccctggtgtacggggaggttcccaaaggaatggtctccacaccggtggaagacctg
gacccctactacagtaatcagaaaacgttcatagtaataaacaaaggaaatttcatcttc
cggttcaacgctgctcctgccttgtacctcctgagccctttcaacctccttagaagaata
tctatttggattttggtccactcattgttcagcttggtgatcatgtgcactatcatcacc
aactgtgtatttatgacactgagtcgcccgcctgactgggccaagaatgttgaatacact
tttactgcaatctacacattcgaatcccttgtaaagattttagcccgagggttctgcata
ggcaagttcacctttcttagagatccatggaattggttggacttctccgtcattgttatg
gcgtatgtaaccgagtttgtaaaccttggcagtttctcagctcttcgtacattcagagtg
ctgcgagctttaaaagctatttctgtgatcccaggcttgaagaccatcgtcggcgcgctg
ttccagtcggtcaagaagctttctgatgtgatgatcctcactgtcttctgcttgagcgtc
tttgccctcatagggttgcaactgtttatgggccatttaaaacaaaagtgtgtgttcatg
ccagtccacaataattcccccatcaatggcacattttccaatgagacctacatgaacgga
gcatacaacaacaaccaggaagaggctttcaactggacagagtattcacttgataataaa
aattactattacctcccaggcaaacgggatccattgctttgtggaaacggcagtgaggct
gggcagtgtccagaagggttttcatgcatcaaagtgggaaggaacccaaactatggttac
accagctttgactcatttggatgggccttcctttctctctttagactaatgactcaggat
tgttgggaaaacttgtaccagcagacactacgggcatcaggaaagccctacatggtgttc
ttcgtgttggtcatattccttggctctttctacctaatcaacctgattttggctgtggtg
gcgatggcgtacgaggagcagagccaggccactatcaaggaggctcaggagaaggaggag
gagtttcaggccatgctggagcagctcaaacgacagcaagatgctcaggctgcagcagtg
gcatcagcagagcacggtgaggtcagcgatcacggcggtgtcatggagagctcctcagaa
acctccaaactcagttcaaaaagtgccaaagagagatgcaacaggcgaagaaaaaaaaaa
gaggagggcaaggtcccaaagtccgagtctcaggagagtattaagaagtcccgatgccgc
ttctctgtggagcccaatatactccactatgacatgaagtgctcatcagcccaccagtcc
tttctgagtattcacggacatccattctcatccagacggaacagcaggaccagcattttc
agtttccaaagccaatcacgagatgtcggctcagaaaatgagtttgcagatgatgagaac
agcatttttgaggacaaccggagtcgaagaacctctttgttttttacccgggggtgtgac
cgcaacagcagcagtatcagccagtccagcttctttccacatccgctactttcaccctgc
aggatgaagcagagcactgtagactgcaatggagtagtgtccttaatgggtgtcgagtca
atcccattatcacctatggggctctttcgtcctaaactgacagtagatatggcctccaat
agagacaaagctgacaccaccgacaccgaaagcggaacaaaccaggaatgtatcgacttt
cctgaggacccagaggccagggacagaactcacagcgtagcaagtgtcataaccagcaca
atggaagagcttgaggaatcgaggcagaagtgtcctccctgctggtacagttttgcaaac
actttccttatctggcaatgttgtccagtctggcttaagataaagaaagtggtcaaacta
attgtgatggatccatttacggatttaaccatcactatctgcattgtactcaacacctta
ttcatggccatggagcattacccaatgactaaggatttctccaggacactaagtgtgggc
aacatggtattcactggcatcttcacggctgaaatggtcttcaaaatcattgctatggat
ccgtactattactttcaggagggatggaatatttttgatggaataattgtcagtttaagc
ttaatggagctgtgtttgtccaatgttgttggaatgtcagtcttgagatcatttagattg
ctgcgagtattcaagttggccaagtcttggcctactctcaacaccctgatcaaaataatt
ggtaactctgtgggagctttgggcaacctgacactggtgctggccattatcgtcttcatc
tttgctgtagtgggcatgcagctgtttgggaaaagctacaaggattgtgtgtgtaaaatc
tccagcaactgcaaactgccccgctggcatatgagtgactttttccattcattcctcatt
gtgttccgagtgctttgtggagagtggatagagaccatgtgggactgcatggaggtggct
ggaccaaccatgtgcatcattgtctacatgatggtcatggttattggaaaccttgtggtg
ctgaacctgttcttggctttgctactgagttcattcagtgcagacaacctcgctgccact
gaggacgacagtgacacaaacaatttgcagatcgccattgcacggatacacaatggcatc
gcctttgttaaatccctgcttcagagcacctgtaacagtgtctgtctacagagcaactcg
caaatccagggagaagataaatcatcccttgaggatttccccaaaggttcagcacccaac
ggtatccctaaccataccattaaagagctaccgaggaacggaaatggagatgtgactgga
gtggacaaaagtggggacaagtacattgtgtgcagcaagactgatgattccataatgtct
ttcatcaacaaccccagtctgactgtcaatgttcctattgcactgggggagtccgacttt
gaaaacctcaacacagaggacttcagcagtgtctcatccgacgcagtggaatgccgtgtg
actgtcgatgacgatggccagctcagcacctctgagggcagcacagcagacatcggggac
aaagatggagactctctagactttgaattagcggaatctatggaacctgacgcctgcttt
cctaacagctgtgtacagaggttccagtgttgccaagtaaatgttgaggtgggctggtgg
aaaatatggtggactatcagaaagacctgtttcagaatagtggagcacaactggtttgag
agcttcatcatctttatgatcctgcttagtagtggtgcattagcttttgaagatgtctac
attgaaacccgtaagaacattaaagcaatgttggagtatgcagacaaaatgttcacctac
atcttcatcttggagatgttactgaagtgggtggcctatggctatgccaagtatttcaca
aatgcttggtgttggcttgacttcctcattgttgctgtttcactggtcagtttgacagcc
aacgctttgggatttgctgaacttggggccatcaaatctctgagaaccctgcgagctttg
aggcccctgagagccctttcgaggttcgagggcatgagggtggttgtcaatgctctgctg
ggggcgattccttccatcttcaatgtactgttggtgtgcctcatcttctggctcatcttc
agcatcatgggcgtgaacttatttgcgggaaagtactatcgctgtgtcaacagaacctca
gatgagcctttcttgcccactcaagtgcagaacatgacacgatgtttggccttagggaag
gacgttgctcgttggaagaatattaaaatcaactttgacaatgttggactgggttacctt
gcactgctgcaagtggctaccttcaagggctggatggacataatgtatgctgcggtagac
tcgccaagcaagaatgaagaacagccagcatatgagatcaacctgaagatgtatctgtat
tttgttgttttcatcatatttggagccttcttcacactcaatctcttcattggtgtcata
attgacaatttcaaccagcaaaagagaaagtttggaggtcaagacatcttcatgactgag
gaacagaagaaatactacaatgccatgaaaaagctgggctcaaagaagccacaaaaacct
attcctagaccatcgaacaagattcaagcatacatatttgacatcaccacaatgcaagca
tttgatgttgtgatcatgattcttatatggcttaacatggttgctatgatggtggaaact
gatgaccagtcagataaaaagaaaggaattctcagctggatcaacggggtcttcatttgc
gtcttcacgggcgagtgtttgttgaagatgatcgcactccgccagtactttttcactaat
ggttggaatgtgttcgatttcattgtcgtcgttctctcaattattggtatgtctctctcg
gagctgattgagaaatattttgtgtcaccaactttgttcagagtcatccgactggctcga
atcggacgcgtgctccgccttattaaaagtgccaaaggaatccggaccctcttgtttgcc
ttgatgatgtcacttcctgccttgttcaacattggtctcttgctctttttggtgatgttt
atctatgccatcttcggcatgtcaaactttgcttatgtgaaaaaggaatcaggcattgac
gaccttttcaattttgagacctttggcaacagcatgatctgcctgtttcagatcaccacc
tcagctgggtgggacgccctattagcgcccattctcaacaaatatgaagacgactgtgac
agtaccatggagcatcctggcagcgctgtcaaaggagactgtggttctccttctgttggc
atcgccttctttgtgagctacatcatcatctgcttccttattgtgataaatatgtacatt
gcagtcatcctggaaaactttggtgtggccacagaggagagcgctgacccactaagtgag
gatgattttgaaatgttttatgaggtttgggaaaggtttgatccaagtgcaacccagttt
atggagtacaacaagctgtctgagtttgctgatgctttggacccaccattacgcatagcc
cagccgaacagcatcgaactaatctctatggatcttcccatggtgagtggcgaacgcatt
cactgcctggacatcctctttgcttttactaaacgggttcttggcgagggtggagagatg
gacatgctaagggcgcaaatggaggagagattcatggcttccaatccttccaaaatgtca
tacgaacccatcacgaccacccttcgccgcagacaggaggacacatcagccgtgatcatc
cagagagctttcagagagcatttgaggagacaggctcctgacaaaacatttgaagaagcc
aaagatgagattccaaatgacgaaaagccagttgacaaagaagttccagtcaaggacaaa
ctcaatgaagtttctggtttagatataaaggagccttcaacctatcagccgtctgaaaat
gacaatgctgaactggatgtcacaggcaaagacggcactgagcatgattcataa
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integrated database retrieval system
