KEGG   Candidatus Pelagibacter giovannonii: E5R92_05040
Entry
E5R92_05040       CDS       T06537                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
peg  Candidatus Pelagibacter giovannonii
Pathway
peg02024  Quorum sensing
peg03060  Protein export
peg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:peg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    E5R92_05040
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E5R92_05040
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E5R92_05040
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:peg02044]
    E5R92_05040
Enzymes [BR:peg01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     E5R92_05040
Secretion system [BR:peg02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   E5R92_05040
  Eukaryotic Sec-SRP protein
   E5R92_05040
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA DnaB_C AAA_14 Zeta_toxin AAA_31 AAA_33 ResIII AAA_30 ATP_bind_1 AAA_19 KTI12 AAA_22 AAA_5 nSTAND3 Thymidylate_kin AAA_7 6PF2K UxuA AAA_28 AAA AAA_8 APS_kinase SWI2_SNF2 AAA_16 DO-GTPase1 YqeC AAA_17 SOAR
Other DBs
NCBI-ProteinID: QIZ21144
UniProt: A0A6H1Q2T8
LinkDB
Position
913560..914918
AA seq 452 aa
MFENLTNKFEEIFSSLKKAASLDENQVDEGLRAIRQALLEADVSLDVAKDFIAKVKPKVL
GKEIIRSTSPGDMVVKIVYDELVSLLGESNTDINLNAVPPVPMMLVGLQGSGKTTTTAKL
AKYLEKNKKKKIMMVSLDVYRPAAQEQLRSLGEQNDILTLPIIEGQLPADICRRAVSAAN
LNGAEIILFDTAGRTQIDLQMMSEIKQIESIIKPTEVFLVADSLTGQVAAEVAKEFKNTV
NVTGIVLTRADGDARGGAALSMKYVSQVPIKFLGVGEKIENLEVFHPDRIANRILGMGDI
VSLVEKAAEDLGEENIKKAEESLKKGQFSMEDYLTQLRQMKKMGGIEGIMSFMPGVSKMK
SQMDASGIDESVITKNEAIILSMTKKERGNPKIIDGSRKKRIANGSGTDAATINKLLKQF
KMMSEMMKKMSKGNLKGMSDKGIPPELLNQLK
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtttgaaaacttaacaaataaattcgaagaaattttttcttctttaaaaaaagcagct
tcacttgatgagaatcaagtagatgagggtttaagagctattaggcaggctctattagaa
gctgatgtatcattagatgtagctaaagattttatagcaaaagttaaaccaaaagtttta
ggaaaagaaataattagatcaacttctcctggggatatggttgttaaaattgtttatgat
gaactagtaagccttttaggtgaaagcaacacagatattaatttaaatgcagttccacca
gtcccaatgatgctggtaggtcttcaaggttccggtaaaactacaacaacagcaaaatta
gccaaatatttagaaaaaaataaaaagaaaaagataatgatggtcagtcttgatgtgtat
aggccagccgcacaagaacaactaagatcattaggagagcaaaatgatattttaacacta
cccattattgaaggccagctaccggcagatatttgtcgaagagcagtaagtgctgcaaac
ctaaatggtgcagagattatattatttgatacagcaggcagaacacaaatagaccttcag
atgatgagtgagattaaacaaatagaaagtataattaagccaacagaagtatttttagtt
gctgattctttaacgggacaggttgctgcagaagttgcaaaagaatttaagaatactgta
aatgtaacgggtattgttttaacaagagctgatggtgatgcaagaggtggtgcggctctt
agtatgaaatatgtttctcaagtaccaattaagtttttaggggtaggagaaaaaatagaa
aatttagaggtttttcacccagatagaatagctaatagaatattaggtatgggagacatc
gtttctcttgtcgaaaaagctgcagaagatcttggtgaagagaatataaaaaaagcagaa
gagagtttaaaaaaaggacaattctctatggaagattatttaacacagcttagacaaatg
aaaaaaatgggaggcatagaaggaattatgtcgtttatgccaggtgtttctaaaatgaaa
tcacaaatggatgcttcgggaattgatgaaagcgttattaccaaaaatgaagcaatcatt
ttatctatgacaaaaaaagaaagaggaaatcctaaaatcattgatggttctaggaaaaaa
agaattgctaatggctctggaacagatgcggccactatcaataaattgcttaagcaattt
aaaatgatgtctgaaatgatgaagaagatgtcaaaaggaaacctgaagggtatgtctgat
aaaggaatacctccagagctactaaatcaacttaaataa

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