Candidatus Pelagibacter giovannonii: E5R92_06120
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Entry
E5R92_06120 CDS
T06537
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00470
D-Amino acid metabolism
peg00550
Peptidoglycan biosynthesis
peg01100
Metabolic pathways
peg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E5R92_06120
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E5R92_06120
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
E5R92_06120
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
peg01011
]
E5R92_06120
Enzymes [BR:
peg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
E5R92_06120
Peptidoglycan biosynthesis and degradation proteins [BR:
peg01011
]
Precursor biosynthesis
Amino acid ligase
E5R92_06120
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_4
GARS_A
DUF1672
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
QIZ21358
UniProt:
A0A6H1Q3F1
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All DBs
Position
1133686..1134741
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AA seq
351 aa
AA seq
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MIIKDIAKQEISEIGNILPLKKNNIIPIKINKSIEIVVVPNFGPKNSHQDNVGIILEEKN
VLRILSKRYKNVLITEINSEEDLEALVKRKPDLVFSGVKYFFFNNRKIWLNDYLEMFEIP
YIASSKAALDNESDKNRAKKIMQKNNIRTADFFITNPGEYLTKSSIPIKFPLFIKPVTGG
DSRGVDKNSIVFNFKDFTSKVLDIKTKQNSPSLVETYLAGKEYSVGIFEDSIDGTLRAMP
IEIIVKENVDGHCILDFNVKKNDEESVILVSDIVVFDKLSKLAKDSFKALGGKSLGRIDI
KMDHLGVPHFIEANLMPGLRKGYFYRSCVLNLDMSYEDMIFSIANTGLSSH
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgattataaaagatatagctaaacaagaaatttcagaaataggtaatattttaccttta
aaaaaaaataatattattccaataaaaattaataaatcgatagaaatagtcgtagttcct
aattttggtccaaaaaattcgcatcaagataacgttggaattattctagaagaaaaaaat
gttctaaggattttatctaaacgatataaaaatgttttaattactgaaattaattcagaa
gaagaccttgaagccctagttaaaagaaagcctgatttagtattctctggtgttaaatac
ttcttttttaataataggaaaatatggctaaatgattatttagaaatgtttgaaattcca
tatatcgcctcaagtaaagcagctcttgataatgaaagtgataaaaatagagcaaagaag
attatgcaaaaaaataatattagaactgcagatttttttataacgaacccaggtgaatat
ttaactaaaagttcaataccaataaaatttccactttttataaagccagtaacaggtgga
gacagtagaggggtagacaaaaattcaattgtatttaattttaaagattttacctcaaaa
gtattagatattaagacaaaacaaaactctccttctttagttgaaacatatttagcagga
aaagaatatagcgttggtatttttgaagatagcattgatggaactttaagagctatgcca
attgaaattattgtaaaagaaaatgtagacggtcattgtatccttgattttaatgttaaa
aaaaatgatgaagagagtgtaattcttgtttcagatattgtagtttttgacaaactttca
aaactagcaaaagattcgttcaaagccttgggtggaaaatctttaggtagaatagatatt
aaaatggatcacttaggtgttcctcattttatagaagcaaacttaatgccgggtcttcga
aaaggatatttttatagatcatgtgtactaaatcttgatatgagttacgaagatatgatt
ttcagtattgcaaatactggtttgtcttcacattaa
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