Planctopirus ephydatiae: Spb1_38540
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Entry
Spb1_38540 CDS
T06220
Name
(GenBank) Nudix hydrolase
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00900
Terpenoid backbone biosynthesis
peh01100
Metabolic pathways
peh01110
Biosynthesis of secondary metabolites
Module
peh_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
peh_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Spb1_38540
Enzymes [BR:
peh01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
Spb1_38540
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GFIT
Motif
Pfam:
NUDIX
NucS_N
NADH_u_ox_C
Motif
Other DBs
NCBI-ProteinID:
QDV31907
UniProt:
A0A518GTJ4
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All DBs
Position
4856880..4857416
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AA seq
178 aa
AA seq
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MEPTHPTEELFDVVNEADEVIDVLPRSVVHARKLCHRAVHVLVFNSEGELLIHQRSAQKD
EEPLTWNSSCSGHVSAGEDYDLAARRELQEELGLDTPIEMIGQLSASPKLAYEHTRVYRT
VTDQPPVFDPGEIAQGCYRTLPEIMADVAARPSVYSQPFRTILAWYQEEYLNKPSLKI
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggaacccacccaccccacggaagaactctttgatgtggttaacgaggccgacgaagtg
atcgacgtcttgccaagatccgtcgtccatgcccgtaagctctgtcatcgcgcagtgcat
gtgctggtcttcaactcagagggcgaactgctgattcatcagcggtcagcacaaaaagat
gaggagccactcacctggaactcctcctgctcaggccatgtctcggcaggagaagattac
gacctggccgccagacgtgaactacaggaagagctagggctcgacacacccatcgaaatg
atcggacagctctcagcctcgcccaaactcgcttacgaacacacacgagtttatcgcacg
gtcaccgaccagccacccgtcttcgatcccggcgaaatcgcccagggctgctatcgcact
ctcccggaaatcatggccgacgtcgctgcccggccatcagtctattcccagccatttcgc
acgattctcgcatggtaccaggaagagtacctcaacaaaccatcgctgaagatttag
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