Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00474
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Entry
SAR11G3_00474 CDS
T01465
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel00020
Citrate cycle (TCA cycle)
pel00190
Oxidative phosphorylation
pel00650
Butanoate metabolism
pel01100
Metabolic pathways
pel01110
Biosynthesis of secondary metabolites
pel01120
Microbial metabolism in diverse environments
pel01200
Carbon metabolism
Module
pel_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pel_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pel_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SAR11G3_00474
00650 Butanoate metabolism
SAR11G3_00474
09102 Energy metabolism
00190 Oxidative phosphorylation
SAR11G3_00474
Enzymes [BR:
pel01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SAR11G3_00474
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
FAD_binding_3
Pyr_redox_2
GIDA
DUF3108_like
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AEA80949
UniProt:
F2I3I1
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All DBs
Position
423784..425568
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AA seq
594 aa
AA seq
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MSKYEIIDHEYDAIVVGAGGSGLRAAVGLSEAGLKTACISKVFPTRSHTAAAQGGISAAL
GNMGEDDWRWHMYDTVKGADWLGDQDSIEFLCKEAPKAVIELEKYGVAFSRTEEGKIYQR
PFGGMTKNYGNGVIQRTCAAADRTGHAILHTLYGQALKKNTEFFIEYFALDLLMHNGKCH
GVLAWSLQDGKIHRFRSNMTILATGGYGRAYFSATSAHTCTGDGGGMVLRAGLPLQDMEF
IQFHPTGIYGAGCLITEGSRGEGGFLVNSEGERFMERYAPSAKDLASRDVVSRSMTVEIN
EGRGVGKDKDHIYLHLNHIDPKTLHERLPGISESAKVFAGVDVTKEPIPVMPTVHYNMGG
IPTNYHGEVLTKDADGSETIVDGLMAIGEAACVSVHGANRLGSNSLIDLVVFGKAASVRT
AQVVKPNSKHETIPESETQKSLDRFDKLRNANGSTPTAVLRDKMQRTMQSKCAVFRTDKT
LKEGLHDIQQPWDGMKDIRVQDKSLIFNTDLVEALEFDNLIRQSMVTVSSAENRKESRGA
HSREDFKDRDDQEWMKHTLAWQKSDGKVEIDYRDVHTYTLSTDVQYFPPKKRVY
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatacgaaattattgaccatgaatatgacgctattgtagttggcgcaggtggc
tcaggcttaagagcagctgttggactgtctgaggcaggtttaaaaactgcatgcatatca
aaagtttttccaactagaagtcacacagctgcagctcaaggaggaatatctgctgcatta
ggaaatatgggtgaagacgattggcgatggcacatgtacgatacagttaaaggtgcagat
tggcttggagatcaagattcgattgaatttttatgtaaagaagcacccaaagcggttatt
gaattagaaaagtatggtgtggcttttagcagaacagaagaaggaaaaatttatcagaga
ccttttggtggtatgactaaaaattatggaaatggtgttatccaaagaacatgcgcagca
gcagatagaactggtcatgcaatattgcacactctttatggacaggctttaaaaaagaat
acggagttttttattgagtactttgctttagatttattaatgcacaatggtaagtgccat
ggtgttttagcatggtcgttgcaagatggaaaaattcacagattcagatcaaacatgact
attcttgctacaggaggatatggtcgagcttatttttcagctacttcagcccacacttgt
actggagacggtggaggaatggttttgagagcaggattaccactgcaagatatggagttt
atacaatttcatcccacaggaatttacggtgcaggctgtttgattaccgaaggaagtaga
ggtgagggtggttttttagttaactctgaaggggaaagatttatggaaaggtatgcacct
tccgcaaaagatcttgcttcgcgagatgttgtttcacgatcaatgactgtagaaattaat
gaaggaagaggagttggaaaagataaagatcatatttatcttcatttaaatcatatagat
ccaaaaactttacatgaacgacttccgggaatttcagagtcggcaaaagtatttgctgga
gtggatgttactaaagagccaataccagtcatgccaacagttcattataacatgggagga
attccaactaattatcatggagaagttttaacaaaagacgcagatggatctgaaacaata
gtagacggtttaatggcaattggtgaggcagcatgtgtctcggttcatggagcaaataga
ttgggatccaactcattaattgacttagtcgtttttggaaaagctgcctcagttcgtaca
gcccaagttgttaaacccaattctaagcatgaaactattccagaatcagagacacaaaaa
tccctagaccgatttgataaattaagaaatgctaatggaagtactcctacggcagttttg
agagataaaatgcaaagaactatgcaaagcaaatgtgccgtttttagaacagacaagacc
ttaaaagaagggcttcatgacatacagcagccttgggatggaatgaaggatattcgcgtt
caggataaatccttaatatttaacacggacttagtagaagctttagagtttgataattta
attagacaatcaatggttacagtttcttctgcagaaaatagaaaagaaagtaggggcgca
cattcaagagaagactttaaagatagagacgaccaagaatggatgaagcatacactagct
tggcaaaaatcagacggaaaagttgaaattgattatagagatgtccatacttacacgtta
agtacagacgttcaatattttccccctaaaaaaagagtttactaa
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