Candidatus Pelagibacter sp. RS39: B5L73_03935
Help
Entry
B5L73_03935 CDS
T11425
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B5L73_03935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pela03021
]
B5L73_03935
03400 DNA repair and recombination proteins [BR:
pela03400
]
B5L73_03935
Enzymes [BR:
pela01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B5L73_03935
Transcription machinery [BR:
pela03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B5L73_03935
DNA repair and recombination proteins [BR:
pela03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B5L73_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ARJ47947
LinkDB
All DBs
Position
complement(733110..734138)
Genome browser
AA seq
342 aa
AA seq
DB search
METENVNIKNWKSLIKPSKIDVQMSDDLSKAKIVAEPLEKGYGLTLGNSLRRILLSSIRG
AAVTSIQIDGVLHEFTSIKGVREDVTDIVLNVKSLALKSSSEGTKKLILDAKGPGEIKAS
DITPVADVEILNPELVICNLDENTSFHMEMNVNTGKGYVPAELNKPEEPPLGLIAIDSLY
SPVKKVSYSVSTAREGKALDYDKLTMEVETDGSISAEDAVAYSARIFQDQLKMFINFDEP
VEAPVKEVSTEPEFNKNLLRKVDELELSVRSMNCLKNDNIIYIGDLVQKSEGEMLRTPNF
GRKSLNEIKEVLTGMSLYLGMEIPNWPPDNIAEMSKKLEEAI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgaaaatgtaaatattaaaaactggaaatctcttattaaaccatcaaagatt
gatgttcaaatgagtgatgatttatctaaagcaaaaatagtagctgagcctttagaaaaa
ggttatggtttaactttgggtaattcattaagaagaattttattatcttcgattagaggt
gcagcagtcacatctatacaaatagacggtgtattacatgagtttacctctataaaaggt
gtaagagaagatgttacagatatagtcttaaatgtaaaatctttagcattaaagtcatct
tctgaaggcactaagaaacttattttagatgcaaaaggacctggtgaaataaaagcttcc
gatataaccccagtagctgatgttgagattttaaatcctgaattagtaatttgtaattta
gatgaaaacacaagttttcacatggagatgaatgttaatacaggaaaaggttacgtgcca
gctgaactaaacaaacctgaggaaccacctttaggattgattgctatagactctttatac
agtcctgtaaaaaaagtttcttattctgtaagcaccgcgagagaaggtaaagcgctagac
tatgataaacttacaatggaagttgaaacagatggttcaatatcagcagaagatgctgta
gcctattctgctagaattttccaagatcaacttaaaatgtttattaattttgatgagcca
gtagaggcacctgttaaagaagtatcaacagaacctgaatttaataaaaatttattaaga
aaagttgatgagttggaattgtctgttagatcaatgaattgtttaaaaaatgataacata
atttatattggtgatcttgttcaaaagtctgaaggtgaaatgcttagaacaccaaatttt
ggaagaaaatcactcaatgaaattaaagaggttttaacaggaatgtcattgtatttgggt
atggagataccaaactggccaccagataacattgctgaaatgtctaaaaagctagaggaa
gctatctaa
DBGET
integrated database retrieval system
