Candidatus Pelagibacter sp. RS39: B5L73_06345
Help
Entry
B5L73_06345 CDS
T11425
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela00020
Citrate cycle (TCA cycle)
pela00190
Oxidative phosphorylation
pela00650
Butanoate metabolism
pela00720
Other carbon fixation pathways
pela01100
Metabolic pathways
pela01110
Biosynthesis of secondary metabolites
pela01120
Microbial metabolism in diverse environments
pela01200
Carbon metabolism
Module
pela_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pela_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pela_M00149
Succinate dehydrogenase, prokaryotes
pela_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
B5L73_06345
00650 Butanoate metabolism
B5L73_06345
09102 Energy metabolism
00190 Oxidative phosphorylation
B5L73_06345
00720 Other carbon fixation pathways
B5L73_06345
Enzymes [BR:
pela01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
B5L73_06345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ARJ48392
LinkDB
All DBs
Position
complement(1186693..1188468)
Genome browser
AA seq
591 aa
AA seq
DB search
MSSYKIIDHEYDVVVLGAGGSGLRAAVGLSEAGLKTACISKVFPTRSHTSAAQGGISAAL
GNMGEDDWRWHMYDTVKGADWLGDQDSIEYLCKEAPKAVIELEKYGVPFSRTDDGKIYQR
PFGGMTKNYGNGIVQRTCAAADRTGHAILHTLYGQALKHKTEFFIEYFALDLLMKDGECK
GLIAWNLNDGTIHRFRSHIVIIATGGYGKVYYSATSAHTCTGDGNAMVLRAGLPLQDMEF
VQFHPTGIYGHGTLITEGARGEGGYLTNSKGERFMERYAPKAKDLASRDVVSRSMSIEIN
EGRGVGKDQDHVHLNLSHLDKEIIESRLPGITDAARLFANVDVTKEPIPVVPTVHYNMGG
IPTNYKAEVLTVNGSEKTVPGLMAIGEAACVSVHGANRLGSNSLIDLVVFGRAAAKRAAE
LIKPGTPHEEISDSETQKCLDRFDKIRNSDGDIGTAELRLSMQKTMQSKCAVFRTEKTLK
EGVDEIRKTFDGLNSLSVKDKSLIFNTDLVETLEFDNLIRQAVVTVDSAYNRKESRGAHA
REDYPKRDDEKFMQHTLAWCDGKKSKISYRDVHKSTLTNEVQYFPPQERVY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatataaaataatagatcacgaatatgatgtagtagttctaggtgccggtggt
tctggcttaagagctgctgttggtttaagtgaagcaggattaaaaactgcatgtatttca
aaagtatttccaacaagaagccatacttctgctgcacaaggtggaatttcagctgccctt
ggaaatatgggtgaggatgattggcgttggcatatgtacgatacagtaaaaggagcagat
tggttaggagatcaagatagcatcgaatacctttgcaaagaagcccctaaggcagtaatt
gaattagaaaaatatggcgttccttttagcagaacggatgatggaaaaatttatcaaaga
ccttttggtggtatgacaaaaaattatggaaatggaatagttcaaagaacatgtgctgca
gctgatcgaacaggacacgcaattttacacactctatacggtcaagctttaaaacataag
acagagttttttattgagtattttgctctcgatcttttaatgaaagatggtgaatgtaaa
ggattgatagcatggaatttaaatgatggaactattcaccgatttagatctcatatagtt
ataatagctacaggaggttatggaaaagtttactattctgcaacatctgctcatacatgc
acaggtgatggaaatgcaatggtgttaagagcaggattaccattacaagacatggagttt
gtacagtttcatccaacaggaatatatggacatggtactttaataacagagggtgctaga
ggtgagggaggttatcttacaaattctaaaggtgaacggtttatggaaagatatgcacca
aaagctaaggatttggcatcgcgagatgttgtgagtagatcaatgtcaattgaaattaat
gagggcagaggtgttggaaaagatcaggatcatgttcatttgaacttaagccatctagat
aaagaaattatagaaagtagattgccaggtataacagacgcagcaagattatttgctaat
gtagatgttacaaaggagccaatcccagttgtgcctacggttcattataacatgggaggt
ataccaactaattataaagcagaagttctaactgtaaatggttctgagaaaactgttcca
ggacttatggctataggtgaggctgcttgtgtttcagttcatggagcaaatagattggga
tctaattctttgatagatcttgtagttttcggaagagcagctgcaaaaagagccgctgaa
ctaattaaacctgggacaccacatgaggaaattagtgattcagaaactcaaaaatgttta
gatcgttttgataagattagaaattcagatggagatattggcactgctgaattaaggttg
tccatgcaaaaaacaatgcaatcaaaatgtgcagtttttagaacggagaaaacacttaaa
gagggtgttgatgaaattagaaaaacttttgatggattgaactctttatctgttaaagat
aagtcactaatatttaatactgacctagtagaaactttagaattcgataatttaattaga
caagctgtcgtgacagttgactcagcctataatagaaaagagagtagaggagctcatgca
agagaagattatcctaaaagagatgatgaaaaatttatgcaacatacattagcttggtgt
gatggaaaaaaatcaaagataagctatagagatgttcataaatccacgttaaccaatgaa
gtacagtactttccacctcaggagagagtgtattaa
DBGET
integrated database retrieval system
