Pelagibacterium flavum: OF122_00790
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Entry
OF122_00790 CDS
T08676
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pem
Pelagibacterium flavum
Pathway
pem02024
Quorum sensing
pem03060
Protein export
pem03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OF122_00790 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OF122_00790 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OF122_00790 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pem02044
]
OF122_00790 (ffh)
Enzymes [BR:
pem01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OF122_00790 (ffh)
Secretion system [BR:
pem02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OF122_00790 (ffh)
Eukaryotic Sec-SRP protein
OF122_00790 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_33
AAA_31
AAA_17
AAA_22
AAA_16
AAA_14
AAA_5
ATPase_2
ResIII
nSTAND_NTPase5
AAA_19
AAA_7
NACHT
Thymidylate_kin
AAA_18
6PF2K
Motif
Other DBs
NCBI-ProteinID:
UYQ72360
UniProt:
A0ABY6IT25
LinkDB
All DBs
Position
153683..155230
Genome browser
AA seq
515 aa
AA seq
DB search
MFESLSDRLGKIFSGITGRGALSEADVQAALREVRRALIEADVSLEVVRAFTEQVGTRAV
GAEVTRSVKPGQQVIKIVHDELVAVLGEEASPISLNAPSPVPILMVGLQGSGKTTTTGKI
AKRLKDKQNKRVLMASLDTRRPAAMEQLKTLGGQIGVDVLEIVPNQSAVEIAKRAISSAR
TGGYDVVMLDTAGRTHIDEELMEETAEIKRVSNPHEILLVADSLTGQDAVNLARSFDARV
DITGIVLTRVDGDGRGGAALSMRAATGKPIKLIGVGEKMDALEDFHPSRIADRILGMGDI
VSLVEKAAANVTAEDAQKMAKKLKKGQFDLDDLMGQLLQMKKMGGMASLMKMMPGMGQMA
KNLPNGRTDDKVFDRQVAIIQSMTKKEREKPDLLNASRRKRIAAGSGVEVSEINKLIKMH
RQMADMMKKVSRGGPGGLAGMFGGMGKQMMGGMPDMDPAQIEQMTKQMGGDSSKLPDDFS
KLVKQGGGGVPGLPGLGGSKFPGLPGLPGLPGKKK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaagcctgtcagaccgcctgggcaagatcttttccgggatcaccggaagaggt
gcgctgagcgaagccgatgtgcaagccgcgctgcgcgaggttcgccgcgcgctgatcgag
gccgacgtttcgctcgaagtggtgcgcgcttttaccgagcaggtcggcacgcgcgccgtt
ggcgctgaggtcacccgttcggtcaaacccggccagcaggtcatcaagatcgtccatgac
gaactggtggcggttctgggcgaggaagcctcgcccatttcgctcaatgctccgtcgccg
gtgccgatccttatggtcggtctgcagggctcgggcaagaccaccacaaccggcaagatc
gccaagcggttaaaggacaagcagaacaagcgtgtcctgatggcctcgctcgatacgcgc
cggccggccgccatggagcagctcaagacgcttggcggccagatcggcgtcgatgtgctc
gagatcgtccccaaccagtcggcggtcgagatcgccaagcgcgcgatttcaagcgccagg
acgggtggctacgacgtggtgatgctcgatacggcgggccgcacccatatcgacgaagag
ctgatggaagagaccgccgagatcaagcgcgtctccaatccgcatgaaatccttctggtg
gcagacagcctgaccggtcaggacgccgtcaacctggcgcgatcgtttgatgctcgggtc
gatatcaccggtatcgttctcacgcgtgtggatggtgacgggcgcggtggtgcggctctt
tccatgcgggctgccaccggcaagccgatcaagctgatcggtgtgggcgaaaagatggat
gcgctggaagacttccatcccagccgtatcgcagaccgcattctgggcatgggcgatatc
gtctcgctggtcgaaaaggccgcggcgaacgtcaccgccgaagacgcccagaaaatggcc
aagaagctcaagaagggtcagttcgatctcgacgacctcatgggccagcttttgcagatg
aaaaagatgggcggcatggcctcgctcatgaagatgatgccgggcatgggccagatggcc
aagaacctgcccaatggccgcaccgacgacaaggtctttgaccgtcaggtcgccatcatc
cagtcgatgaccaagaaagagcgcgaaaaacccgacctgctcaacgcctcgcgccgcaag
cgcattgcggcgggttcgggcgtcgaggtttccgagatcaacaagctcatcaagatgcat
cgccagatggcggacatgatgaaaaaggtgtcgcgcggcgggcccggtggactggcgggc
atgttcggcggcatgggcaagcagatgatgggcggaatgcccgacatggacccggcccag
atcgaacagatgacaaagcagatggggggcgattcctccaagctgcccgacgatttttcc
aagctcgtcaagcagggtgggggcggagtgcccggccttcccggacttggcggctcgaaa
ttcccgggacttccgggattgcccggattgccgggcaaaaagaagtag
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