KEGG   Pseudomonas entomophila: PSEEN4943
Entry
PSEEN4943         CDS       T00362                                 
Name
(GenBank) Hfq protein
  KO
K03666  host factor-I protein
Organism
pen  Pseudomonas entomophila
Pathway
pen02024  Quorum sensing
pen03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PSEEN4943
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PSEEN4943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pen03019]
    PSEEN4943
   03036 Chromosome and associated proteins [BR:pen03036]
    PSEEN4943
Messenger RNA biogenesis [BR:pen03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PSEEN4943
Chromosome and associated proteins [BR:pen03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PSEEN4943
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: CAK17587
UniProt: Q1I449
LinkDB
Position
complement(5247772..5248032)
AA seq 86 aa
MSKGHSLQDPYLNTLRKEKVPVSIYLVNGIKLQGQIESFDQFVVLLKNTVSQMVYKHAIS
TVVPARPVRLPSPSDAEHGDSEPGNA
NT seq 261 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttacttgaacaccttgagaaaagaaaaagtc
ccggtttcgatctatctggtcaacgggatcaagctgcagggtcagattgaatccttcgac
cagttcgtcgtgctgctgaagaacaccgtcagccagatggtctacaagcacgccatttcg
accgtcgtacctgcccgtccggttcgtctgccaagcccgtccgatgccgagcacggcgac
agcgagccaggcaacgcttga

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