Pseudomonas entomophila: PSEEN4943
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Entry
PSEEN4943 CDS
T00362
Name
(GenBank) Hfq protein
KO
K03666
host factor-I protein
Organism
pen
Pseudomonas entomophila
Pathway
pen02024
Quorum sensing
pen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSEEN4943
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSEEN4943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pen03019
]
PSEEN4943
03036 Chromosome and associated proteins [BR:
pen03036
]
PSEEN4943
Messenger RNA biogenesis [BR:
pen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSEEN4943
Chromosome and associated proteins [BR:
pen03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PSEEN4943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
CAK17587
UniProt:
Q1I449
LinkDB
All DBs
Position
complement(5247772..5248032)
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AA seq
86 aa
AA seq
DB search
MSKGHSLQDPYLNTLRKEKVPVSIYLVNGIKLQGQIESFDQFVVLLKNTVSQMVYKHAIS
TVVPARPVRLPSPSDAEHGDSEPGNA
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcattcgctacaagacccttacttgaacaccttgagaaaagaaaaagtc
ccggtttcgatctatctggtcaacgggatcaagctgcagggtcagattgaatccttcgac
cagttcgtcgtgctgctgaagaacaccgtcagccagatggtctacaagcacgccatttcg
accgtcgtacctgcccgtccggttcgtctgccaagcccgtccgatgccgagcacggcgac
agcgagccaggcaacgcttga
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