Hoylesella enoeca: AS203_02890
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Entry
AS203_02890 CDS
T04173
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
peo
Hoylesella enoeca
Pathway
peo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AS203_02890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peo03019
]
AS203_02890
03400 DNA repair and recombination proteins [BR:
peo03400
]
AS203_02890
Enzymes [BR:
peo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AS203_02890
Messenger RNA biogenesis [BR:
peo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AS203_02890
DNA repair and recombination proteins [BR:
peo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AS203_02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
Helicase_Sgs1
Cas3-like_C_2
zf-CXXC
Helicase_C_2
NT_N
Motif
Other DBs
NCBI-ProteinID:
ALO48161
UniProt:
A0A0S2KIM5
LinkDB
All DBs
Position
complement(651616..653463)
Genome browser
AA seq
615 aa
AA seq
DB search
MDISFILKKYYGFSTFRPNQREIIDDIVAGNDCLVLMPTGGGKSLCYQIPALAMPGTAVV
VSPLISLMYDQVEALKANGIAAEALNSGNDMNQDLIIKRRCLAGDIKLLYMSPERLIAEI
PFLLSEIKISLIAIDEAHCISQWGHDFRPEYSQLGILHDRFPQTPIVALTATADKVTRQD
IIKQLRLRVASDNHIYISSFDRPNLSLSVRKESGKAEKMRVIIGYIERHPDDAGIIYCLS
RKTTESIADYLRKRNIRAEAYHAGMSASERSRIQEQFKTDQTPVVCATIAFGMGIDKSNV
RWIFHYNMPKSIESFYQEIGRAGRDGAPADTFLFYSLADMIQLRRFANDSGQREVNLEKL
QRMQDYAESSVCRRRILLNYFGEQSDHDCGHCDVCLSPPRKFDGTQVIQKALSAMARTDQ
RIRFGTVIEILRGMASTTVVQNGYDHIKTFGVGRDISTTEWQDYLLQMLQMGFIEVAYNE
GDIIKITPSGQDILYGRKQADLAIHRKSEPVGRKETKRALRQREQTEMAASQIFPEVHAS
RVEDANLFAALRQLRSALAQAQGFPAYIVLSDKVLHALATDKPTTKEQFGNIPGIGEYKQ
KKYSDAFIQVIKRFV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggatatatcttttattctcaaaaaatattatgggttcagcacgttcagaccgaaccaa
cgcgaaatcatcgacgatattgtcgcgggcaacgattgcctcgtgttgatgccgacaggc
ggcgggaagagtctgtgttaccagattccggctttggccatgcccgggacggctgttgtg
gtgtcgcctttgatcagtctgatgtatgatcaggtggaagcgctcaaagccaatggtatc
gcggccgaagcgctcaacagtggcaacgatatgaatcaggatctgatcatcaaacggcgt
tgtttggccggcgacatcaaacttctttatatgtcgcccgaacgattgatcgcagagatc
cccttcttgctcagtgaaatcaagatcagtctcatcgctattgacgaagctcactgcatc
agccaatggggacacgatttcagacccgagtattcgcaactgggcattctgcacgaccga
ttcccgcagacaccaatcgtggctctcacggcgacggccgataaagtgacgaggcaggat
atcatcaagcaacttcgtctgcgagtggcttccgacaaccatatttatatctcctcattc
gaccgccccaacctgtcgttgagcgtgcgaaaagagtcggggaaggccgagaagatgagg
gttatcatcggctatatcgagcgtcatccggacgatgcgggcatcatttattgcctcagt
cggaaaaccaccgagagcatagccgactatctacgcaagcgaaacatccgtgcagaggcc
tatcacgccggtatgtcggccagcgaacgcagccggattcaggagcaattcaaaaccgat
cagacacccgttgtctgtgccacgattgctttcgggatgggcatcgacaagagtaacgtg
cgctggatattccattacaacatgcccaaaagcatcgagagcttttaccaggagatcggt
cgtgcaggccgagacggtgcaccggccgacacctttctattttattcgttggccgacatg
atccaattgagacgctttgccaacgatagcggacagcgtgaggtgaatctcgagaaactg
caacgcatgcaggactatgccgaaagcagtgtatgccgccgtcgtattctgttgaactac
ttcggcgaacaaagcgatcacgattgcggtcactgtgacgtgtgcctgagtccgccccgg
aagtttgacgggacgcaggtcattcaaaaagcactcagcgcaatggcccgcaccgatcag
cgtattcgattcgggacggtcatcgaaatccttcgcggcatggcatcgaccaccgtcgtg
caaaacggttacgaccatatcaagacattcggtgtgggacgcgacatcagcacgacagag
tggcaagactatctcttgcagatgctgcaaatgggctttatcgaagtcgcttacaacgaa
ggcgacatcatcaagattacgcccagcggacaagacattctctatggtcgcaaacaagca
gatttagccatccaccggaaatccgaacccgtcgggcgaaaggagaccaagcgcgcgctc
cggcagcgtgaacagacagagatggcagcctcgcagatcttccccgaagtgcatgcttcg
cgtgtggaagacgccaatctgttcgcggcgctgcgccaattgcgttcagctttggcccaa
gcgcaggggttccccgcctatatcgttctgtcggacaaagtgctccatgccctcgccacc
gacaaaccgacaaccaaggagcagtttggcaacattcccggaattggcgaatacaagcaa
aagaaatatagcgacgcctttatccaagtcatcaaacgattcgtctga
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