Pedobacter sp. PACM 27299: AQ505_11335
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Entry
AQ505_11335 CDS
T04140
Name
(GenBank) hypothetical protein
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep00906
Carotenoid biosynthesis
pep01100
Metabolic pathways
pep01110
Biosynthesis of secondary metabolites
Module
pep_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
AQ505_11335
Enzymes [BR:
pep01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
AQ505_11335
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Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DUF7713
UPF0302
Motif
Other DBs
NCBI-ProteinID:
ALL06032
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All DBs
Position
complement(2693572..2694729)
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AA seq
385 aa
AA seq
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MEHFDYIIAGGGCAGRSLAVRILPYIQASNKRVLLVDYEEKKSNDRTWCFWEEHPDVFEP
AVYRKWDRLSFASKFLHQELDIKPYQYKMIRGLDFYAHTDQLLADQPQLIRLQGKVEKQY
TEKDQAYVVIDGKTFSADYVFSSIPQVQEKKPDRYQYFLQHFEGWLIETEGNTFDQECAT
LMDFNTSQQAGTSFVYVLPLSSNRALVEYTIFSKQELAPEDYSAALQQYIQEQLKCMQYT
IIEKEHGVIPMTDHPIKRQQERIIYLGTAGGFTKGSTGYTFRFIQKHTAAIVKQLMESGH
PNLPAISSPRFALYDATLLHLLDSERISGEEIFSRMFEKNSARKILKFLDNESTLLEEVQ
IFSTLQKTEFAMALLNRTIKIMSNS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagcactttgattacatcatcgccggaggcggatgtgctggacgaagccttgcagta
cggatactcccctatatccaggccagcaataaacgcgtactgctcgtagactatgaggag
aaaaaatccaacgacagaacctggtgtttttgggaagaacatccggatgtatttgaacct
gccgtatatcggaaatgggaccgcttatcatttgccagcaaattccttcatcaagaatta
gacatcaagccctatcaatataaaatgatccgtggactggatttctatgcacatacggat
caattattagcagatcagccgcagttgatccgcttacaaggaaaggtagaaaagcagtac
acggaaaaagatcaggcttatgtagtgattgatgggaagactttcagcgctgattatgtg
ttcagcagtattccccaggtccaggagaaaaaacctgatcgttaccaatatttcctgcag
cattttgaaggctggctgatagaaactgaaggcaatacctttgaccaggaatgtgcgaca
ttgatggactttaacacctcacagcaagcaggcacctcatttgtttatgtattgccgctc
agctcaaatcgcgctttagtggaatacacgatcttttctaagcaagaattagctccagaa
gattatagcgccgcattgcagcaatacatccaagagcagctaaaatgcatgcaatatacc
atcatagaaaaggaacatggtgtaattccaatgactgatcatcccatcaaaaggcagcag
gagcgtattatttatctaggtactgcaggaggatttacaaaaggctctaccggttatacc
tttagatttatccagaaacataccgcagcaattgtgaaacaattgatggagtccgggcat
cccaatcttccagcaatttcatcaccaaggtttgccctctatgatgccacgcttttacat
ttgctcgattctgaacgcatttcaggtgaggagatcttctccaggatgttcgagaaaaac
agcgccaggaaaatcctgaaattcctggacaatgaatctactcttttagaagaagtacag
attttcagtacgctgcagaaaacagagtttgcaatggctttattgaaccgtactataaaa
ataatgagcaacagttag
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