Peribacillus sp. S4: ACJ9PY_00665
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Entry
ACJ9PY_00665 CDS
T11198
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pers Peribacillus sp. S4
Pathway
pers03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pers00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACJ9PY_00665 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pers03021
]
ACJ9PY_00665 (rpoB)
03400 DNA repair and recombination proteins [BR:
pers03400
]
ACJ9PY_00665 (rpoB)
Enzymes [BR:
pers01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACJ9PY_00665 (rpoB)
Transcription machinery [BR:
pers03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACJ9PY_00665 (rpoB)
DNA repair and recombination proteins [BR:
pers03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACJ9PY_00665 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XMN25582
LinkDB
All DBs
Position
122210..125779
Genome browser
AA seq
1189 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLDLPNLIEIQTASYQWFLDVGLKEMFQDISPIEDFTG
NLSLEFIDYSLAEPKYSVEETKERDVTYSAPLRVKVRLVNKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYNGKMDKNGKLGFSATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPITVLMRALGFGTDQEIIDLIGDNEYLRNTLEKDNTESVEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFGQRIAETLIDPETG
EIIVEKGTMLDRRTLDRILPHIEGGIGFKTFHPSGGVVEEETLLQPIKVFAPNDAEGEKV
INIIGNAYVTDQVKNITPADIISSISYFFNLLHGVGITDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNPY
GFIETPYRRVDPETGKITSQIDYLTADEEDNYVVAQANVRLSDDGSFLDNDVVARFRGEN
TVVPRDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLQPEAPRVGT
GMEYVSAKDSGAAVICKHPGIVEHVESREVWVRRVSEVDGQQVKGNLDKYRLLKFIRSNQ
GTCYNQRPIVSVGDNVVKGEILADGPSMEKGELALGRNVLVAFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDE
LPPGVNQLARVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPVDIMLNPL
GVPSRMNIGQVLELHLGMAARALGIHVASPVFDGATEEDVWGTIEEAGMSRDAKTVLYDG
RSGEAFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGL
DVKILNAEDREIEMRDLEDEDEANQADKLSLDSETKDMVASEVGAPVKE
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaacttgttcagtatggacgacaccgccaacgtagaagttatgcaagaatc
agtgaggttttggaccttccgaatctgattgaaattcaaacagcttcttatcaatggttt
ctagatgtaggtttaaaggaaatgttccaggatatttctcctattgaggattttacaggt
aatttatcgttagaattcatcgattacagcttagctgagccgaagtattctgtggaagaa
acaaaagaacgcgatgttacgtattctgcaccacttcgtgtgaaagtgcgccttgttaac
aaagaaacaggggaagtaaaagaccaagatgtatttatgggcgacttcccgctgatgact
gaaacaggtacatttgtcatcaatggtgctgaacgggtaattgtatcccaattagtgcgc
tcaccgagtgtttactacaatgggaaaatggataaaaacggtaagcttgggttctctgcg
accgttattcctaaccgtggcgcatggctcgaatacgaaacagacgccaaggatgttgtg
tatgttcgaatcgaccgcaccaggaaattaccgataacggtattgatgcgtgcccttgga
ttcggaacagatcaagaaatcatcgatttgatcggtgacaacgaataccttcgcaacact
cttgaaaaggataacaccgagagtgtggaaaaagcattactagaaatctatgagcgtcta
cgcccaggcgaaccgcctactgtcgaaaacgcgaaaagtcttttagtatcacgctttttt
gatccgaaacgttatgatttagctaatgtaggccgttataaaataaacaaaaaactgcat
attaagaaccgtttattcggacaacgtattgcagagactttgattgatcctgaaacggga
gaaatcattgttgaaaaaggtacaatgcttgatcgccggactcttgataggattctgcct
catatcgaaggtggaataggattcaaaacattccatccatcaggtggtgtagtagaggaa
gaaactcttcttcaacctattaaagtgtttgcaccaaacgatgctgaaggcgaaaaagtg
atcaatatcatcggtaatgcttatgtgaccgaccaggtcaaaaacattacaccggctgat
atcatttcttccatcagttatttctttaatttattgcatggtgtgggaatcacggatgac
attgaccatttaggtaaccgtcgtctgcgttccgttggtgaattgctgcaaaaccaattc
agaattggtttatcccgtatggagcgtgttgtccgtgaaagaatgtccattcaggatacg
aacacaatcactccacaacaactaatcaacattcgcccggtcattgcatccattaaagag
ttctttggaagttcacagctttcccagttcatggatcaaacgaacccgttggctgagttg
acgcataaacgtcgtctatctgcattgggacctggtggtctgacacgtgagcgtgctggc
tttgaagtacgtgacgttcattattcccactatggccgcatgtgtccgattgaaacgcct
gagggaccgaatattggtttgattaactcgttatccagttttgcaaaggttaacccatat
ggcttcattgaaacaccataccgccgtgtggaccctgaaacaggtaaaattacaagccaa
atcgattacttaacagctgatgaggaagataactatgtagttgcccaagcgaatgtacga
ctgtctgatgacggctcattccttgataacgatgttgttgcacgtttccgcggtgaaaat
accgttgttccgcgtgaccgcgtagattacatggatgtatctcctaaacaggttgtatct
gccgcgactgcatgtattcctttcttggaaaacgatgactccaaccgtgcccttatggga
gcgaacatgcaacgtcaagcagttcctttgcttcaaccggaagcccctcgggtaggaacg
ggtatggagtatgtttcagcgaaagactccggtgctgccgtaatctgtaaacaccctggt
atcgtagagcacgttgaatcacgtgaagtatgggtacgtagggtaagtgaagtagacggg
cagcaagtaaaaggaaatcttgataaatatcgtctattaaaattcattcgttccaaccaa
ggaacgtgctataatcaacgccctatcgtaagtgttggcgacaatgtcgtaaaaggtgaa
attcttgctgatggtccttcaatggaaaaaggtgagttggcacttggacgtaacgtattg
gtagccttcatgacatgggatggatataactatgaagatgccatcatcatgagtgaacga
ttggttaaagatgatgtgtacacttccattcatattgaagaatatgaatctgaatcacgc
gatacaaaattagggcctgaagaaatcacccgtgatatccctaacgtaggggaagatgcg
cttcgtaatcttgatgagcgcggaattatccgtgtgggtgctgaagtgaaagacggagac
cttctcgttggtaaagtcacgcctaaaggtgtaacggagctgactgctgaggaacgtcta
ttacatgcaatcttcggtgaaaaagcacgtgaagtaagggatacatcacttcgtgtacct
cacggcggtggcggaatcgttcttgatgttaaagtatttaacagagaagacggcgatgaa
ctgcctcctggtgtaaaccaactcgcacgtgtatatatcgttcaaaaacgtaaaatccat
gaaggcgataaaatggccggacgacatggtaacaaaggggtaatctccaggattcttcct
gaagaagatatgccttatctaccggacggcactccagtcgacatcatgttaaacccattg
ggtgtaccttcacgtatgaacatcggtcaggtgttggagctacacttgggtatggctgca
cgcgcacttggcattcatgtagcatctcctgtattcgatggtgccactgaggaagacgtt
tggggtacgattgaagaagccgggatgtcccgtgatgcaaaaactgtcctttatgatggc
cgttcaggtgaagcattcgataaccgtgtatcagttggtgtcatgtacatgatcaaactg
gcgcatatggtcgatgataaacttcatgcacgttcaactggaccttactcccttgttacg
cagcagccacttggtggtaaagcgcaatttggtggacagcgtttcggtgagatggaagta
tgggcacttgaagcttatggtgccgcttatacattacaagaaatcctaaccgttaaatca
gatgatgtcgtgggtcgtgttaaaacgtacgaagcgattgtcaaaggtgaaaatgtccct
gaaccaggcgttcctgagtcattcaaagtattgattaaggagcttcaaagtttaggattg
gatgttaaaatcctcaatgccgaagatcgtgaaatcgaaatgcgtgatttggaagatgaa
gatgaagccaaccaagcagacaaattaagccttgattcagaaactaaagatatggttgct
tccgaagtaggggcacctgtcaaagaataa
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