Candidatus Sodalis pierantonius: SOPEG_0330
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Entry
SOPEG_0330 CDS
T03006
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pes
Candidatus Sodalis pierantonius
Pathway
pes00300
Lysine biosynthesis
pes00470
D-Amino acid metabolism
pes01100
Metabolic pathways
pes01110
Biosynthesis of secondary metabolites
pes01120
Microbial metabolism in diverse environments
pes01230
Biosynthesis of amino acids
Module
pes_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SOPEG_0330 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SOPEG_0330 (dapF)
Enzymes [BR:
pes01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SOPEG_0330 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AHF73011
UniProt:
W0HGZ2
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All DBs
Position
complement(318761..319585)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPEMIRRLSDRHCGVGFDQLLVVESPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRMKNLTNKRDILVSTQMGRMMLTVTEDDMVRVNMGE
PNFDPQQVPFRAAKAEKTYIMRAAEQTVLCGVVSMGNPHCVIAVDSVGSAPVLTLGPVLE
SHERFPERANIGFMQVLNRGHIRLRVYERGAGETQACGSGACAAVAVGISQGQLVEQVQV
DLPGGRLDISWRGPGHPLYMTGPATHIYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggcctgggtaacgacttcatggtcgtggatgccgtgacg
caaaatgtctatttctcacccgagatgatccgccgtctgtcggaccggcattgcggcgtg
ggatttgatcaactgttggtggtggaatcgccctatgatccggaactggatttccattat
cgtatattcaacgctgacggcagcgaagtggcgcaatgcggcaatggcgcacgctgtttt
gcccgtttcgtgcgcatgaaaaatctgaccaacaaacgcgacattcttgtcagcacccaa
atggggcgcatgatgctgaccgtcaccgaggacgatatggtgcgcgttaatatgggcgag
ccgaatttcgacccacagcaggtgccgtttcgcgcggccaaagctgagaaaacctatatc
atgcgcgcggcggaacagacggtgctgtgcggcgtggtttccatgggcaatccacactgc
gtgattgccgtggacagcgtggggagcgctccggtgctgacgctcgggccggtgcttgag
agtcacgagcgctttccggaacgggccaatatcggtttcatgcaggtgttgaaccgcggg
catatccgcctgcgggtctatgaacgcggcgcgggtgaaacccaggcttgcggcagcggc
gcttgcgccgcggtcgcggtggggatctcgcagggccaattggtggaacaggtgcaggtg
gaccttcccggcggccggctcgacatcagctggcgcgggccgggacatccgctgtatatg
accggacccgccacccatatctatgacggatttattcatctatga
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