KEGG   Candidatus Sodalis pierantonius: SOPEG_0330
Entry
SOPEG_0330        CDS       T03006                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pes  Candidatus Sodalis pierantonius
Pathway
pes00300  Lysine biosynthesis
pes00470  D-Amino acid metabolism
pes01100  Metabolic pathways
pes01110  Biosynthesis of secondary metabolites
pes01120  Microbial metabolism in diverse environments
pes01230  Biosynthesis of amino acids
Module
pes_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pes00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SOPEG_0330 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SOPEG_0330 (dapF)
Enzymes [BR:pes01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SOPEG_0330 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AHF73011
UniProt: W0HGZ2
LinkDB
Position
complement(318761..319585)
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPEMIRRLSDRHCGVGFDQLLVVESPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRMKNLTNKRDILVSTQMGRMMLTVTEDDMVRVNMGE
PNFDPQQVPFRAAKAEKTYIMRAAEQTVLCGVVSMGNPHCVIAVDSVGSAPVLTLGPVLE
SHERFPERANIGFMQVLNRGHIRLRVYERGAGETQACGSGACAAVAVGISQGQLVEQVQV
DLPGGRLDISWRGPGHPLYMTGPATHIYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggcctgggtaacgacttcatggtcgtggatgccgtgacg
caaaatgtctatttctcacccgagatgatccgccgtctgtcggaccggcattgcggcgtg
ggatttgatcaactgttggtggtggaatcgccctatgatccggaactggatttccattat
cgtatattcaacgctgacggcagcgaagtggcgcaatgcggcaatggcgcacgctgtttt
gcccgtttcgtgcgcatgaaaaatctgaccaacaaacgcgacattcttgtcagcacccaa
atggggcgcatgatgctgaccgtcaccgaggacgatatggtgcgcgttaatatgggcgag
ccgaatttcgacccacagcaggtgccgtttcgcgcggccaaagctgagaaaacctatatc
atgcgcgcggcggaacagacggtgctgtgcggcgtggtttccatgggcaatccacactgc
gtgattgccgtggacagcgtggggagcgctccggtgctgacgctcgggccggtgcttgag
agtcacgagcgctttccggaacgggccaatatcggtttcatgcaggtgttgaaccgcggg
catatccgcctgcgggtctatgaacgcggcgcgggtgaaacccaggcttgcggcagcggc
gcttgcgccgcggtcgcggtggggatctcgcagggccaattggtggaacaggtgcaggtg
gaccttcccggcggccggctcgacatcagctggcgcgggccgggacatccgctgtatatg
accggacccgccacccatatctatgacggatttattcatctatga

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