KEGG   Populus euphratica (Euphrates poplar): 105113249
Entry
105113249         CDS       T05872                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105113249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:peu03400]
    105113249
DNA repair and recombination proteins [BR:peu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     105113249
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA FHA_2 Yop-YscD_cpl
Other DBs
NCBI-GeneID: 105113249
NCBI-ProteinID: XP_011007647
UniProt: A0AAJ6TGN7
LinkDB
Position
Unknown
AA seq 648 aa
MTHSPIAYLVPLSPSLEENASIPKLALSIGQNTIGRNDIWASDKRLSRNHLSLTLSLTSS
TITVEGTNPVAVVKSGEQRRKLRAGEKAEIINDDIIELIPGNYFYKYVLITPNGNLQKRG
CFEGRENGTGESKRKKIREGISSSSKVEMESGGPQRNCKDEAIRDFGVSEDELALTFRLL
RVKELPAWANTSCVSINDVIKGDILVAILSNYMVDMDWLLSACPTIAKVPNVMVIHGEGD
GTLEHMKRRKPANWILHKPWLPISFGTHHSKAMFLVYPRGVRIIVHTANLIHVDWNNKSQ
GLWMQDFPWKEKKPGKGCGFENDLVDYLSVLKWPEFIVKLPNLGSISINASFFKKFDYSH
AAVRLIASVPGYHTGADLRKWGHMKLQSVLQECTFDNEFKRSPLVYQFSSLGSLDEKWMT
ELAISMSSGYAEDKTPLGLGEPQIIWPTVEDVRCSLEGYAAGNAIPGPLKNVEKGFLKKY
WAKWKASHSGRCRAMPHIKTFTRYNSQKLAWFLLTSSNLSKAAWGALQKNNSQLMIRSYE
LGVLFLPSSIRRYGSGFSCTSDGCPSMFQDNCGSLADSEELRATLVTLKWQGTSDSASKV
IPLPVPYELPPKPYSSEDVPWSWDRRYSKKDVYGQVWPRTVQLYTSQD
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgactcactcacctatcgcctacttagttccactgagtccaagtctcgaagaaaacgct
tcaatccctaaactcgctctctccatcggccaaaacaccatcggcaggaacgacatttgg
gcctccgataaaagactcagccgtaaccacctctccctaaccctatccctaacctcatcc
actataaccgtggaggggactaatccggtggccgtggttaaatcgggggaacagaggagg
aaactgagagccggagagaaagcggagataattaacgatgatattattgagttaatccct
ggtaattatttttataagtacgtgttaattactcctaatggtaatttacagaagcgaggt
tgtttcgagggaagagaaaatggtacaggtgagagcaagcggaagaagattcgagaaggg
attagtagtagctcaaaggttgagatggaaagtggtggaccgcagaggaattgtaaggac
gaggcgattagggattttggtgtttcggaggatgaattggcgttgacatttcggcttttg
agagtgaaagagttgccagcttgggctaatacgtcttgtgtttcgataaatgatgtgatt
aagggagatatacttgttgctatactttcgaattacatggtggatatggattggttactg
tctgcatgtccgacaattgcaaaagttcctaatgtcatggttattcatggggagggtgat
ggtacattggagcatatgaagagaaggaagcctgcaaattggattctgcacaaaccctgg
ctacccatttcatttgggacacaccattcaaaggctatgtttcttgtctatcctcgagga
gtgcgaattattgttcatacagcaaatttaatacatgttgactggaataacaaaagccaa
ggtttgtggatgcaagatttcccttggaaggagaagaagcctggaaaaggatgtggattt
gaaaatgacttggttgattatcttagcgtgttgaagtggcctgaatttattgtaaagtta
ccaaaccttgggagtattagtatcaatgcatcctttttcaagaaatttgattatagccat
gcagcggtcaggttaattgcatctgttcctggatatcatactggtgccgatctaaggaag
tggggacatatgaagctacaaagtgttcttcaagaatgcaccttcgacaatgagtttaaa
aggtctcctcttgtttatcagttctcttcccttggttctttggatgaaaagtggatgacc
gaactggccatttcaatgtcatccggatatgctgaagataaaacacctcttggtcttgga
gagcctcaaataatatggcctactgtagaggatgtcagatgctccttagagggttatgca
gctggaaatgctattccaggcccactaaagaatgttgaaaaaggatttttgaagaagtat
tgggctaaatggaaggcatcccattctggccgctgtcgggcgatgcctcatataaagact
ttcactcgctataacagccagaaacttgcttggtttttgcttacttcatcaaatcttagc
aaagcagcctggggggctttgcagaagaataattctcagttgatgatccgttcgtacgag
ctgggagtgctctttctaccatcttccataagaagatacggttctggattttcttgcaca
agtgatggatgtccatccatgtttcaggataattgtggatcattagctgattctgaagag
ctgagagcaacactagtgactctgaaatggcaaggaactagcgattcggcatccaaagtg
attccattgccagtgccttatgaactccctcctaaaccatacagctcagaagatgttccc
tggtcttgggaccggcgctatagcaagaaggatgtctacggccaggtttggccaaggacc
gtacagctttatacttctcaggactag

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