Populus euphratica (Euphrates poplar): 105115461
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Entry
105115461 CDS
T05872
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04120
Ubiquitin mediated proteolysis
peu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105115461
04120 Ubiquitin mediated proteolysis
105115461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
peu04121
]
105115461
Enzymes [BR:
peu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105115461
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
U-box type E3
105115461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
105115461
NCBI-ProteinID:
XP_011010651
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MATTSNKPQRSLQEIEDIMLRRILSVSLADSSDPGIFYLEMTAAEILSEGKDLKLTRDLI
ERVLIDRLSVQSPNAEPPFNYLLGCYRRAVDELKKIANMKDKNVKSELELSIKQVKKLSV
SYCRIHLGNPDLFGGDSSVVRKSGHSNVSPVLPLIFAMVDGFNSGGIQPPPPGFLEEFFR
EGDFDSLDPILKGLYEDLRGNVLKVSVLGNFQQPLRALLFLVSFNVGAKSLVSHKWWIPT
GAYVNGRVIEMTSILGPFFHISASPDNTIFKSEPDVGQQCFSDATNRRPADLLSSFTTIK
TLVNNLYDGLAEVLLALLKNGDTRESVLQYLAEVINRNATRAHIQVDPLSCASSGMFINL
SAVMLKLSEPFLDANLSKRNKIDPNYVFHNDRLDLRGLTALLASSEEITQWLNTPGKTDI
SAQSNDVENRLVQSQEATSSGRSGEKSKYSFICECFFMTARVLNLGLLKAFSDFKHLVQE
ISRCEDMLSTFKALQEQTPSQQLQQDIDRLEKDIELYSQEKLCYEAQILRDGSLIQHALS
FYRLMLVWLVSLVGGFKMPLPSTCPKEFASMPEHFVEDAMELLIFASRIPKALDGVLLDD
FMNFIIMFMASPTYIRNPYLRAKMVEVLNCWMPRRSGSSATASLFEGHQLSLEYLVRNLM
KLYVDIELTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRDIWRKIAKEEEKGVYLNFLNF
LINDSIYLLDESLSKILELKALEAEMSNTTEWERRPAQERQERTRLFHSQENIIRIDMKL
ANEDLSMLTFTSKQITAPFLLPEMVDRVATMLNYFLLQLVGPQRRSLTLKDPEKYEFRPK
QLLEQIVCIYVHLARGDNENIFPAAISKDGRSYNEQLFTAAVDVLRRIGKDGRVIQEFIE
LGTKARVAASEAMDAEASLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSD
NTDPFNRSHLTVDMLIPNTELKARIEEFVRSQELKRHGEDFSL
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacctcaaataaacctcagagatctctccaagaaatcgaggacattatgctc
cgcagaatcctctcagtctccctcgccgactcctctgatcctggaattttctacttagaa
atgacagcagctgagattctcagtgaaggcaaagacttgaaactcactcgcgacttaatc
gaacgtgtcttgatcgatcgattgtctgttcaaagccctaacgcggaacctcctttcaat
tacctcttaggctgctaccgtcgtgctgttgatgagctgaagaaaatcgccaatatgaag
gacaaaaatgtgaaatcagagctggaattgtcgatcaagcaagtcaagaagttgtcggtt
tcgtattgcaggattcatttagggaatcctgatttgtttgggggtgattcgagtgttgtt
agaaagagcgggcattccaatgtttctccggttctgcccttgatttttgcgatggttgat
gggtttaatagtggcggaattcagccaccgccgccggggtttttagaggagttttttaga
gaaggggattttgatagcttggatccgattttgaagggtttatatgaggatttgagggga
aatgttttgaaggtttctgttttagggaattttcaacaaccattaagggctttattgttt
ttggttagttttaatgtcggtgctaaatcacttgttagtcataagtggtggattccgaca
ggggcatatgtaaatgggagagttattgaaatgacaagtattttgggtcctttttttcat
attagtgcatcgcctgataatactatttttaagagcgagccagatgttgggcagcagtgt
ttctctgatgcaacaaatcgtcgacctgctgatttgttatcttcatttactacaattaag
actcttgtgaataatttatatgatggattagcagaagtgcttcttgctcttcttaaaaat
ggtgatactcgcgagagtgtgcttcagtatcttgctgaggtgattaatagaaatgcgaca
agagctcacatacaggtcgatcctttatcttgtgcaagttcgggcatgtttatcaatcta
agtgctgtcatgcttaagctatccgaaccttttttagatgcaaatttgtcaaaaaggaac
aaaatcgatccaaattacgtgtttcacaatgaccgtttggatctaagagggttgacagct
ctgcttgcatcatcagaagaaatcactcaatggcttaatactcctggaaaaactgatatc
tctgcacaatctaatgatgttgaaaatcgcttggtacagtctcaagaagccaccagttct
ggtagaagtggtgaaaagtctaaatactcatttatttgtgagtgcttctttatgactgca
agggtgctcaacttgggtctgttgaaagcattttctgactttaagcatctagttcaggaa
atttctagatgcgaagatatgctctccacttttaaagccttgcaggagcagacgccgtct
cagcagctgcagcaggatattgaccgtcttgagaaagatatagagttatattcacaggaa
aagctttgttatgaagctcaaatattaagggatggatctcttattcaacatgcactttct
ttctaccggttaatgttggtttggttggttagcctggttggtggatttaaaatgcctctt
ccatcaacttgcccaaaggaatttgcctcaatgccagagcattttgtggaagatgccatg
gaactacttatatttgcctctcggattccaaaagctttggatggagtcttactggatgat
tttatgaacttcattatcatgttcatggcaagtccaacatatattagaaacccttattta
agagcaaagatggttgaagtactgaactgctggatgccacggagaagtggttcatctgct
acagcttctctatttgaagggcaccaattgtcacttgagtatcttgtgaggaacctcatg
aagctttatgttgacattgagctcacaggctctcacacacagttctatgacaagttcaac
atacggcataatattgccgaacttcttgaatatctatggcaggtccctagtcatcgtgat
atttggagaaagattgctaaggaagaggaaaagggtgtctatctgaatttcttgaacttc
ctgatcaacgatagcatctatcttcttgatgaaagtctgagcaaaattcttgaactcaag
gcgttagaagctgagatgtcaaacactacagaatgggagcgaagaccagctcaagagagg
caggagaggacccgccttttccattcccaagagaatatcatccgcattgacatgaagttg
gcaaatgaagatttgagcatgctgacatttacgtcaaaacagattacagcacctttcctt
ctccctgagatggttgacagagtggccaccatgctcaattacttcttgttacaacttgtg
ggtccccagaggagatctctcaccctgaaagaccctgaaaagtatgaatttcgcccaaaa
cagttgcttgagcagattgtctgtatatatgttcatttggcgaggggtgataatgaaaac
atattcccagctgccatctcgaaggatgggcggtcatacaatgagcagttatttactgct
gctgttgatgtccttcggagaattggcaaagatgggagggtcatccaggaatttattgag
cttggtacaaaagccagggttgcagcttctgaggcaatggatgctgaagcttcccttgga
gagataccagatgaattccttgatccaattcagtacactttgatgaaggatccggtgatc
ttaccttcttcaagaatcacagttgataggcctgtcattcaaaggcatcttctgagtgac
aatactgaccccttcaaccgatcccatcttactgtggacatgttgattccaaacactgag
ttgaaggcaagaatagaggagttcgtcaggtcccaagaattaaagaggcatggggaagac
ttcagcttgtag
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