Populus euphratica (Euphrates poplar): 105127210
Help
Entry
105127210 CDS
T05872
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105127210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105127210
03036 Chromosome and associated proteins [BR:
peu03036
]
105127210
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105127210
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105127210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
TPR_Nup160_C
HEAT_Nup120
NUP160_helical
Motif
Other DBs
NCBI-GeneID:
105127210
NCBI-ProteinID:
XP_011026710
UniProt:
A0AAJ6UC72
LinkDB
All DBs
Position
Unknown
AA seq
1512 aa
AA seq
DB search
MSARGGMEVPIIGTDSIKFIDISVPDVGDADLSTTSSATAASITLTTSLTEDYGSSSITG
DPPLSFIWRIHKSQPKTLELLQLSATKDFPGTTGLRITFPHALCPFAYVCQNQSQMPAFS
TTNPYLLYALTISGVAYLIKLRNITAYSSLPVLPRDEVTHFSLNGRDSSNSEPAAITSVA
AAAGCLAVGRIDGSVAYFQLGLLHHSTPGFVNELRDDSGIGRLWGFMSRGRMVGAVQDLV
ISEAHGLKLLFVLHSDGMLRVWNLSFRSKILSHALGIPNSEAVTFARLWVGEAKEDASMT
PLAVLCRHNLDIRREMIHVYRLHCTLGDKTVLSVESSMQDISLEEGECIDVKLSSDKIWI
LKDNGLLSHKLFHIDTEDARCYTLQEEFVAEQLFQSSELSSDDLLWITYSLFSSMKENIV
PFVSSIFIRRLLLPGVHHNDVLRSTLLDYHRHWTDLEFQSLTVDGLKKEVRSVIENQGVS
ESPMSVFCHWKNFCARYFHYWCKNNSPCGLLVQSSAGAVCLVRKNSVSLFRDLENIEMII
DGSSDELVDLASFGLDLSNDESARGILLEVLRCIISMSQHLGKPASAVFYESLISTPIVS
SEEIVPRMLKILETGYSSSVSSDHISDLGGDFAWDKELADRKSLRKFSIDMLLSLHTLSK
KATSWSKVLNVIESYLQFLVPRRIIQKLNAEMSFDINTSILVQATSQIAKFIFESALDIL
LFVSYLLKISGQINMLHDDTSRIQLEFIPMIQEIVSEWLIIHFLSTTPSESPSIEDFSSQ
LSSLQIDNKTDRRSWNEKLGKCDFTLAFILSLTFHTSSGDPSQPSSHCLPNPQEIVNLVR
GFTSWIIWGKTGEESTSFLRRSSEIALILLRHGQYGAVEYLLTIVEANSRREKVSRSIQD
NDGDWCILHHLLGCCLLAQARYGFQGVLKEKKVCEAIRCFFRASSGKGASKALKDLSQDA
GLPNFGFDDCASPAAWKLHYYQWAMQIFEQYNISEGACQFALAALEQVDEALSQKDDSSG
TDVINESDTTIKGRLWANVFKFTLDLDHLYDAYCAILSNPDEENKYICLRRFIIVLYERG
AMKVLCNGQLPFVGLAEKIEQELAWKAERSEILAKPNPYKLLYAFEMHRHNWRRAASYIY
QYSARLRTEVDLKDHQRMSLVLQERLNGLSAAINALHLIQSEYAWINPLFGGNSVHNESY
PSKKAKKLVKEHLTGSDVQAQRLQFYIDVEKLEKEFVLTSAEYLLSLANVKWTFTGTEKA
PSDLVDLLVEANLYEMAFTVLLKFWKGSGLNRELERVFSAMSLKCCPNKLGSSSTRMHGL
LLTSSKEEIVVHGSPDMGPTSQNHQGNAQWETLELYLEKYRTFHTGLPATVAETLLHTDP
LIELPLWLVHMFKESRRDRTWGMAGQVSNPASLFRLYVDYGRFTEATNLLLEYTESFASV
RPSDLINRKKPFAAWFPYTTIERLWCQLEELSNLGHMVDHYGKLKSLLHGALQNHLKQVK
VDSEDALSAAAC
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaggggggggatggaggttcccattatcggcactgattccatcaaattcatc
gacatatctgtccccgacgtcggcgacgctgatttatcaaccacttcttctgctactgct
gcttccattactcttacaacttctctcactgaagattatggctcctcctccatcactggc
gatccgcctctctctttcatttggaggattcataagtcccagcctaaaactctcgagtta
cttcaactctctgctactaaagacttccccgggacaaccgggttgcgaattacctttccc
catgccctttgccctttcgcttatgtttgccagaatcagagccagatgcctgctttctct
actacaaatccatacttgctctatgcattgacaatttcgggagtcgcttatcttatcaaa
ctccgaaacattactgcttattcttccttgcctgttttaccaagggatgaggttacccat
tttagtttgaatggtcgtgattccagtaattccgagcctgcggcaataactagtgtagca
gcggccgctggatgtcttgcagtaggtagaattgatggatctgttgcttattttcaactt
ggattgcttcaccatagtacccctggttttgtgaatgagttgcgggatgattcagggatc
ggtcgtttgtggggtttcatgtcaaggggtaggatggttggagctgtacaggatttggta
atatcagaggcacatgggctaaaacttttgtttgtgcttcattctgatgggatgttacga
gtatggaacttgtccttccgcagcaagattttaagtcatgcattgggcattccgaattca
gaagcagtgacatttgccagattgtgggtcggtgaagctaaggaagatgcaagcatgact
ccattagctgtcttgtgtaggcataatttggacattaggagggagatgattcatgtctat
cgccttcactgtactttgggggacaagactgttttgtcagtagagtcttcaatgcaagat
atttctcttgaggagggggaatgtatcgatgtcaaactcagttcagacaagatatggata
ttaaaagacaatggattgctatctcataaattgtttcatattgatacggaagatgcccgc
tgctatactttacaggaagaatttgttgctgagcagctatttcaaagttccgaactttct
tcagatgatcttctttggattacgtattcattattttcatctatgaaggaaaacattgta
ccgtttgtatcttctatctttatacgtagattgcttctccctggtgttcatcacaacgac
gtgcttcgttcaactttgctggattaccacaggcactggactgatttggaattccagtcc
ttaactgttgatgggctcaaaaaggaagttcgatcagtgattgaaaatcagggtgtcagt
gaaagtccaatgtcagtattttgccactggaaaaatttctgcgctcgctatttccattac
tggtgcaagaacaattcaccatgtggtttgttagttcagtcctctgcaggtgctgtttgt
ttagtcagaaagaattcagtgtctctatttcgtgatttggaaaacatcgagatgattatc
gatggttcttctgatgaacttgtcgatcttgcaagcttcggattggatttatccaatgat
gagtctgcacgtgggattctattagaagttctgagatgcattattagtatgagccaacac
cttgggaaaccagcatctgctgtattttatgaatcactcattagcacacccattgtttca
tcagaggaaattgttccacgcatgctgaagattctggaaactggatacagttcatcagta
tcatcagatcacatatcagatcttggaggtgattttgcttgggacaaggagctggcagat
cgtaaaagtttgaggaagttctctattgacatgctattatctctgcatactttatccaaa
aaagctacatcttggagcaaagttttgaatgtcattgaaagctatctacaatttcttgta
ccccggaggatcatacaaaaactaaatgctgaaatgtcatttgatatcaatacttctatt
ttggtccaggctacttctcaaattgctaagtttatctttgagtctgcattggacattctt
ctgtttgtaagctatcttctgaaaatcagtggacagattaatatgttgcatgatgataca
tccagaatacaacttgaattcattcctatgattcaagaaattgtttctgagtggttgatt
atccatttcctcagcaccacaccctctgaatctccttcaattgaagattttagttcccaa
ctctcatcattgcaaattgataacaaaactgacagaagatcgtggaatgaaaaacttggg
aaatgtgattttacattggcttttatactttcactaacatttcacacttcctctggagac
ccaagccaaccttcttcgcattgtctcccaaatccacaagagatagttaatttagtaaga
ggctttacaagctggattatctggggcaaaactggggaagaatctacttctttcctaagg
cgttcatctgagattgctttaatcctccttaggcatggtcaatatggtgccgttgagtat
ctgctcacaattgtggaggctaattcacggagggagaaggtatctagaagcattcaagat
aatgatggtgattggtgcattcttcatcatcttctaggatgctgcctccttgctcaagct
aggtatgggttccagggagtgttgaaagagaagaaagtttgtgaagccattcgctgtttt
ttcagagcttcatctggaaaaggagcttccaaagctttgaaagatttgtctcaagatgca
ggattgcccaattttggttttgatgattgtgcctcacctgctgcttggaagcttcattac
taccagtgggcaatgcagatatttgaacaatataacattagtgaaggtgcctgtcagttt
gctcttgctgctctggaacaagttgatgaagctcttagtcagaaagatgattcctctggg
acagatgttatcaatgaatcagacactactatcaaaggacggctttgggcgaacgtcttc
aagtttactttagaccttgatcacttatacgatgcatattgtgcaatactttcaaatcca
gatgaggagaacaagtacatctgcttgaggcgtttcataattgttctctacgagcgtggg
gcaatgaaggtactttgtaatggtcagttacccttcgttggtttagcagagaaaattgag
caagagcttgcttggaaggcagaacgttctgaaatcttggcaaagccaaacccgtataag
ttgctttacgcatttgaaatgcaccgacataactggagacgggcagcaagttacatatat
caatattcagctcgtttgaggactgaagtagatctgaaagatcaccagcgcatgtcactt
gtgctgcaagaaaggctaaatggcctctctgctgcgatcaatgcactgcatctcatccaa
tctgaatatgcttggataaatcctctgtttggggggaactctgttcataacgagagttat
ccaagtaaaaaggcaaaaaaattggtgaaagaacacttgactgggagtgatgttcaggcc
caaaggctgcagttttacattgatgttgagaaacttgaaaaggagttcgttctaacatct
gcagaatatttgctttcattagcaaatgtcaaatggacattcactggaacagaaaaggct
ccatcagatttggttgatctcttggtcgaggcaaacttatatgaaatggcatttacagtt
cttttaaaattctggaaaggttcaggattgaatagggaattggaaagagttttctcagct
atgtcattgaaatgctgtcccaataaactgggctcctcatctaccaggatgcatggtctt
ttgttgacatcctcaaaagaagaaatagttgttcacggttcacctgacatgggtcctact
tctcagaatcatcaggggaatgctcagtgggagactcttgagctttatcttgaaaaatat
agaacttttcatactggattaccagcaactgttgcggaaacacttctccacacagatcct
ctgattgaattgcctctgtggctggtacatatgttcaaggagagtagaagggacaggacc
tgggggatggctggccaagtatcaaatcctgcatctttgttcaggctatatgttgattat
ggtcgatttacagaagctacaaatctgttgcttgagtataccgaatcatttgcatcagtg
agaccgtcagacttgattaatcggaaaaagccatttgcagcatggttcccatacacaacg
atagagcgcctatggtgccagcttgaggaattgagtaatttgggtcacatggttgatcac
tatgggaagctcaaaagtctattgcatggagctttgcagaaccacctcaagcaggtgaag
gtggactctgaagatgcattatccgctgctgcctgctaa
DBGET
integrated database retrieval system
