Populus euphratica (Euphrates poplar): 105127530
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Entry
105127530 CDS
T05872
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c isoform X1
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
peu04141
Protein processing in endoplasmic reticulum
peu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105127530
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105127530
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105127530
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
peu01009
]
105127530
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105127530
03009 Ribosome biogenesis [BR:
peu03009
]
105127530
03110 Chaperones and folding catalysts [BR:
peu03110
]
105127530
04131 Membrane trafficking [BR:
peu04131
]
105127530
03051 Proteasome [BR:
peu03051
]
105127530
03029 Mitochondrial biogenesis [BR:
peu03029
]
105127530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peu04147
]
105127530
Protein phosphatases and associated proteins [BR:
peu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
105127530
Spliceosome [BR:
peu03041
]
Complex B
Other components
Prp19 complex
105127530
Complex C
Prp19-CDC5 complex
105127530
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105127530
Chaperones and folding catalysts [BR:
peu03110
]
Heat shock proteins
HSP70 / DNAK
105127530
Membrane trafficking [BR:
peu04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
105127530
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
105127530
Proteasome [BR:
peu03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
105127530
Mitochondrial biogenesis [BR:
peu03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
105127530
Exosome [BR:
peu04147
]
Exosomal proteins
Proteins found in most exosomes
105127530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
105127530
NCBI-ProteinID:
XP_011027172
UniProt:
A0AAJ6UC20
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFSDPSVQNDIKLWPFKVVAGPGDKPMIVVTYKGEEKQFAA
EEISSMVLIKMREIAEAFLGTAVNNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATTVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGVDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNERVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYAYNMRNTVKDEKIGSQLSPADKKKIEDAIDQAIQWLDSNQLAEVDEFED
KMKELESICNPIIAKMYQGAGPDMGGSMDEDIPSTGGSGAGPKIEEVD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaaggagaagggccagcgatcggtatcgatctaggcacaacatactcatgc
gtcggcgtatggcagcatgacagggttgaaatcatagctaatgatcaaggcaacagaacg
acaccgtcatatgttgctttcactgatactgagcgtttgattggcgatgctgctaaaaac
caggtcgccatgaatcccatcaacaccgtctttgatgcaaagcgtttgattggtaggaga
ttcagcgatccttcagttcagaatgatatcaagctctggccattcaaggtcgttgctggt
cctggtgacaagcctatgattgtggttacttacaagggcgaggagaaacaatttgctgct
gaggagatttcttcaatggttctcattaaaatgcgtgagattgctgaggctttccttggc
accgctgtcaataatgcggtggttactgtccctgcttacttcaatgactctcaaaggcag
gccacgaaggatgctggtgtcattgccggcctaaatgtcatgcgtattatcaacgaaccc
actgccgctgctatcgcttatggtcttgacaagaaggcaacgactgttggcgagaagaat
gtgctcatctttgatttgggcggtggtacttttgatgtctctcttcttaccattgaagag
ggtatctttgaggtgaaggctactgctggagatacccaccttggaggtgaggacttcgac
aacagaatggtgaatcactttgttcaggagtttaagaggaaacataagaaggatattagt
ggaaatcccagagctctaaggaggttgaggactgcttgtgagagggctaagagaactctc
tcatccactgctcagacaaccatagagattgattccctgtttgagggggttgatttctac
acgactattacacgtgctagattcgaggagcttaacatggatcttttcaggaagtgtatg
gagcctgtagagaagtgtttgagggatgctaagatggacaagagcactgtacatgacgtg
gtccttgttggtggttccactagaatccccaaggtgcagcagctgttgcaggactttttc
aatgggaaggagctttgcaagagcattaaccctgatgaggctgttgcttatggtgctgct
gtccaggctgcaatcttgagtggtgagggcaatgagagggtacaagatttgctacttttg
gacgtcactcctctttctctgggattggaaacggctggaggtgttatgactgttttaatt
ccaagaaacaccaccatccccacaaagaaggagcaggtgttctccacctattcggacaac
caacctggtgtcttgatccaagtttttgagggtgagagagcaagaacaaaggacaataac
ttactgggcaaatttgagctatctggcattcctccagcaccaaggggtgttcctcaaatc
acggtgtgctttgatattgatgccaatggtatattgaacgtctccgctgaggacaagact
actggccagaagaacaagattacaatcactaatgataagggaaggctgtcgaaggaggag
attgagaaaatggtacaggaagctgagaagtacaagtctgaggacgaggaacacaagaaa
aaggttgaagctaaaaatgccttggaaaattatgcctataacatgagaaacaccgtgaag
gatgagaagattggatcccagcttagcccagctgataagaagaaaatcgaggatgcaatt
gatcaggccattcagtggttggacagcaaccagcttgcggaggttgatgaattcgaggac
aagatgaaagagctggagagcatttgcaatcctataattgccaagatgtatcaaggcgct
ggtcctgacatgggtggcagcatggatgaagatattccatcgactggtggcagcggtgct
ggccctaagattgaggaagtagattga
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