Populus euphratica (Euphrates poplar): 105132775
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Entry
105132775 CDS
T05872
Name
(RefSeq) uncharacterized protein LOC105132775
KO
K12600
superkiller protein 3
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105132775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105132775
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
105132775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_17
TPR_14
TPR_16
TPR_9
TPR_19
TPR_CcmH_CycH
TPR_20
TPR_8
TPR_12
BTAD
DUF2989
DUF6584
Motif
Other DBs
NCBI-GeneID:
105132775
NCBI-ProteinID:
XP_011034755
UniProt:
A0AAJ6URV3
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MLKSGEEQEEDLEKQRAAAVELRELEKLVEANPDDPSLRFNLAVYLWERCEIKEKAAEHF
VVAVKLNPQNATAFKYLGHYYYEKEKVRALKCYQRSVSLNPDDSQSGDALCDMLDQTGKE
TLELSLCTEASQKSPRAFWAFRRLGYIHLHHNRCSEAVHTLQHAIRGFPTSPDLWEALAL
AYQKLGMYTAATKSYGRAIELEDRRVFALIQSGNIFLTLGNFRKGVEQFQRALEISPQNV
SANYGLASGLLAWSKECMNMGAFRWGASLLEDACKVADKIAQLAGNFSCIWKLHGDIQLN
YAKCFPWMKDDQSVEFDVETFHASILTWKQTCYLASTLAKRSYQRALHLAPWQANLYIDI
GIASDLISSMNENYGHDQHPWQLSEKMVLGALLLEGDNYEFWVALGCLSGHNALRQHALI
RGLQLDVSLAIAWAYLGKLYREEGEKNLARLAFDCSRSIDPSLSLPWAGMSADSQIRELT
PEEAFESCSRAVQILPVAEFQIGLAKLALISGSLASSQVFGAIRQAVQKAPHYPETHNLH
GLVCEARSEYQGAITSFRLARCAINISSGDTSKSRFQVIAVNLARSLSKAGYAADAVQEC
ESLRKKGMLDSEGMQIYAFCLWQLGENDHALSVVRNLASSVSAMEQALAAASVSFICRML
YYISGLDLAVSSILKMPKEFLQSTKVWIVASAIHALDHSNRLAQAVSSSHYSLLSHDEII
EKHYLTALAKLVKHGSDYCLGFQSGISHIKKALHSYPNSNLLRNLLGHLLLSCEEWKETH
VASRCCIKEAPNCASKQGLKSGCEILGAGAVACYAIGNKDPKFSYPACGYQCLNGPGAVQ
ELQKYMRQEPWNHRAQYLLILNLLQKAREERFPSKICAILERLILVALSNEFYSREIMSY
QYQKFQLLLCASEISLQGGNIAGCIKHAKNASSLLVPNNYLFFGHLLLCRAYAAVDDYTN
LQQQYIRCLELKTDYNIGWMCLKIIESLYNVESDSKISVLSLKECSKEWKNSWNMWIAVF
NLVLGLISLWKEEYFSAEESLVQACSLASSESCLFLCHGVACIKLARQFCSSDYLSLAVS
SLTHAHANSVIPLPIVSLLLAQAEGSLGSKQNWEKNLRFEWYSWPPEMRPAELFFQMHLL
SLQSEAGFETPSTVELCQSPLKWVLRAIHTNPSSLRYWNILRKLME
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcgggagaagaacaagaagaggatttagaaaagcaaagagctgcagctgtg
gagttgagagagttagagaagttagtagaagccaatcctgatgacccctctcttcgattc
aacctcgcagtgtatttgtgggaaagatgcgaaatcaaggagaaggcagcagaacatttt
gttgtagcagtgaaactgaaccctcagaatgcaactgctttcaaatatttgggtcattat
tactacgagaaggagaaggtcagggctctcaaatgctaccagaggtctgtctccctcaac
ccagacgattctcaaagcggagatgcactttgtgatatgttggaccagactggaaaggag
accctggagctctctctctgcactgaagcctctcaaaaatcaccaagagccttttgggct
ttcaggagactgggttacattcacctccaccataatagatgctctgaagctgttcatact
cttcagcatgccattcgaggttttcccacctctcctgatttatgggaagctttggctctt
gcctaccagaaacttggcatgtatactgctgctactaagtcttatggacgagccattgag
ttggaggataggagagtttttgctctcattcaaagtggaaatatcttcttgacgctcgga
aatttccgaaagggagttgagcagtttcagcgagctttggagatctcacctcaaaatgtg
tctgcaaactatgggttagcttctggactccttgcttggtcaaaggaatgtatgaatatg
ggtgcatttaggtggggagcttcattgttagaggatgcatgcaaggttgctgataaaatt
gctcagctggctggaaatttttcatgtatctggaaattgcatggtgacattcagcttaac
tatgcaaagtgttttccatggatgaaagatgatcagagtgtagaatttgatgttgagact
ttccatgcttccatccttacctggaagcaaacttgctatttggcctccacacttgccaaa
aggtcgtaccaacgtgctctgcacttggctccatggcaagctaacctttatattgacatt
ggaattgcttcagatctcatttcttctatgaatgagaattatgggcacgaccagcatcct
tggcagctatcggaaaagatggttctgggggccttgttactcgagggtgacaattatgag
ttctgggtggcactgggatgtttatctggtcataatgccttgagacagcatgccttgatc
aggggattgcaattggatgtctccttagctattgcttgggcatatcttgggaagctttac
agagaagaaggagagaagaacttggcaaggttggcatttgattgcagcagaagtatagat
ccttcactttcattgccatgggctggcatgtcagctgatagtcaaattagggagttgaca
ccagaggaggctttcgagagctgttcacgagctgtgcagatacttcctgttgcagagttc
caaattggtcttgctaaacttgctttgatttcagggagccttgcgtcttcacaggttttt
ggagccatccggcaggcagtccagaaagcccctcactatcctgaaactcataacttgcac
ggtctagtttgtgaggcacgatctgagtatcagggtgctattacttcgtttcgtctagca
cgctgtgcaatcaacatttcttcaggtgacacatcaaaatctcgtttccaagtgatagca
gttaatttggcacgatctctgagtaaggctgggtatgctgctgatgctgtacaagaatgt
gaaagtttgagaaaaaaaggtatgcttgattcagaaggtatgcagatatatgctttctgt
ttatggcaacttggtgagaatgaccatgcgctctctgtggtaagaaatctggcttccagt
gtttcagcaatggaacaggcacttgcagcagcttctgttagttttatctgcagaatgcta
tattacatttctggactggatttggcagtttccagcattttgaaaatgccaaaagaattt
ctccagagtacaaaagtctggattgtagcatctgccattcatgctcttgatcacagtaat
cggcttgcacaggctgtttcaagcagtcactactctcttttatcccatgacgagatcatt
gaaaaacactatttaacagctcttgctaagctggttaaacatggatcagattattgcctt
ggatttcagagtggaattagccacattaaaaaagctcttcacagttaccccaatagtaat
ttgcttaggaatctactcggtcatcttttgctatcatgtgaagaatggaaagaaactcat
gtagctagtaggtgctgcatcaaagaagctcctaactgtgcaagcaagcaaggtttaaag
tcaggatgtgaaattcttggtgctggggcagttgcttgctatgcaattggcaataaagat
ccaaaattttcttacccggcatgtggttatcaatgccttaatggacctggagctgtccaa
gaacttcagaaatacatgcgccaagaaccttggaaccatagggctcaatacttgcttata
cttaatcttctacagaaggctcgggaagagagattccctagcaaaatttgtgccatactt
gagcgtttaattttggtggcgctttcgaatgagttctattcaagagaaattatgtcttat
caatatcaaaagtttcagcttttgctttgtgcttctgagatcagtttgcaaggtggaaat
atagcaggctgtatcaaacatgctaaaaatgcttcatcacttttggttcctaataactac
ctgttttttggacacttgctgctatgtcgtgcctatgctgcagtggatgattatacaaac
ctccagcaacagtatataagatgcctagaactgaagacagattataatatagggtggatg
tgtcttaaaattattgaatctctgtataatgtggaaagtgattcaaaaatctcagtgttg
agcctcaaggaatgctcgaaagagtggaagaattcatggaatatgtggatagctgtattt
aatttggttctgggattaatatctttatggaaggaggagtacttttcagctgaagaatcc
cttgtgcaagcttgttcgctggccagttctgagagctgcctttttctctgccatggtgtt
gcatgtataaagcttgccagacagttttgtagctctgattacttatctcttgctgtaagt
agcctcacccatgctcatgcgaattctgtcatccccttgcctattgtatcgttactgtta
gcgcaagcagaagggagccttggttcaaagcaaaattgggagaagaacctccgctttgaa
tggtattcttggccaccagaaatgagacctgcagaactcttctttcaaatgcatttgctt
tcactacaatcagaagctgggtttgaaactccatccacggtggaattatgtcagagccca
cttaaatgggttcttcgggcaatccatacaaatccgtcttctttgagatattggaacatc
ctgcgtaagcttatggaatga
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integrated database retrieval system
