Populus euphratica (Euphrates poplar): 105134667
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Entry
105134667 CDS
T05872
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105134667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105134667
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105134667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_16
Motif
Other DBs
NCBI-GeneID:
105134667
NCBI-ProteinID:
XP_011037461
UniProt:
A0AAJ6UXZ6
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MEGTLNILPLKRAGSNESHVKGNKRMKETKEKATDYAKPFAIRGLLERLDSGRYGSVTDD
IRSLFNRRAQLMRPFLSLHPTLSNEPRGGGMSFGEEKCNVIDLDDDEIEGGGDSVGNVAV
GRTPVVVIDSDDDESNENRMVGHFQGIVLPKPEGHFSTDVMIGDDVGRRIQGEVVSLTGE
PDSKKDKGVYVGVEEDEVDTEIKDDGLGDIWKEMSFALECSKDVVENSPSDENMEEDEDY
CDHSFVLKDDIGYVCRICGVIERAIDTIIEIQFNKVKRNTRTYISESQNAKDRDSNGMVG
ADLFEEDLMVTDIPAHPRHMKQMKPHQVEGFNFLRNNLVADNPGGCILAHAPGSGKTFMI
ISFMQSFLAKYPHAKPLVVLPKGILPTWKREFQIWQIEDFPLYDFYSVKADSRQQQLEVL
KQWVEQKSILFLGYKQFSSIVCDDGKNQVSVTCQEILLRRPSILILDEGHTPRNENTDVL
QSLAKVQTPRKVVLSGTLYQNHVKEVFNVLNLVRPKFLKMDTSRAIVKRILSKVNIPCAR
KQFKAGADAAFYDLVEQTIQKDQNFKRKVTVIRDLREMTSKVLHYYKGDFLDELPGLVDF
TLVLNLSSRQKHEVKKLKKLAMKFKRSSVGSAVYLHPKLNSSENSAITDDMMDNLLETVD
VRDGVKAKFFLNILSLCESAGEKLLVFSQYLTPLKFLERLVMKEKGWILGKEIFVISGES
SSDHREWSMERFNNSTNAKIFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAF
RPGQTKKVYAYRLVAADSPEEEDHNTCFRKEAIAKMWFEWNEYCGYQDFAVGTVELDDSG
DHFLESPPVREDVRVLYKR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtacactgaacattttgcctctaaaacgcgcaggttcaaatgagtcgcatgtt
aagggaaataaaaggatgaaagagacaaaagaaaaagcaactgattacgccaagccattt
gcaattcgtggtttactggagcggttagatagtgggagatatggaagtgttacggacgat
atccgatcactttttaaccggagagctcaattgatgcgtccatttttgtctttgcatcct
acgctgtcgaatgagccacgtggtggagggatgagtttcggtgaggaaaagtgtaatgtg
attgatttggatgatgacgagattgagggtggtggtgattctgttggaaatgtcgctgtg
gggagaacgccggttgtggttattgactcggacgatgatgagagtaatgagaataggatg
gttgggcattttcaggggattgttttgcctaagcccgaggggcatttttccactgacgtt
atgattggtgacgatgttggtagaagaattcaaggagaagtggtgagccttactggtgaa
cctgactccaagaaagataaaggtgtttatgttggtgtagaggaggatgaagttgacacg
gagatcaaagatgatggtcttggagatatctggaaagaaatgtcatttgcattggaatgc
tccaaggatgttgttgaaaattctccatctgatgaaaacatggaagaagatgaagattat
tgtgatcactcttttgtcttgaaggatgatattggttatgtttgtcgcatatgtggggtt
attgagagagcaattgatactataattgaaatccagtttaataaggtcaaaaggaataca
aggacttacatctctgaatcccagaatgccaaggacagagattcaaatgggatggttgga
gctgacttgtttgaagaagatttgatggtaactgacatccctgctcatccaaggcacatg
aagcaaatgaaacctcatcaagtggagggtttcaattttcttcgcaataatttggtggca
gataatccaggggggtgcatccttgctcatgctcctggatctggtaagacatttatgata
atcagttttatgcaaagttttctagccaaatatccacatgcaaaaccactagtggtgctt
ccaaaaggaatattgcctacatggaaaagggagtttcagatatggcaaattgaggatttt
ccgctgtatgatttctactctgttaaagcagatagtaggcaacaacaattggaggtcttg
aaacagtgggtggagcagaagagtatccttttcttggggtacaaacagttctcctctatt
gtatgtgatgatgggaagaaccaagtgtcagttacttgccaggagatattgctaagaaga
ccttcaattctaattttggatgaaggccatactccgaggaatgagaatacagacgtgtta
caatctctagccaaagtgcagacgcctcgtaaagttgtgctgtctggaaccctctaccaa
aatcatgtcaaggaggtgttcaatgtattgaatctagttcgtccaaagttcttgaagatg
gatacctcccgagctattgtcaagcgcatcttgagtaaagtaaacattccatgtgcaagg
aagcaattcaaagcaggtgcagatgcagctttctatgacttggtagagcaaaccatacag
aaagaccaaaatttcaaaaggaaggtgactgttatacgagatctgcgggagatgactagc
aaggttcttcattattataaaggagatttcttggatgagcttccagggctggttgatttc
actttggtgctgaacctcagttccagacagaagcatgaggtgaaaaagttgaagaagttg
gcaatgaagttcaagagaagttctgttgggagtgctgtttatcttcacccaaagttgaac
tcctccgagaactctgccataactgatgatatgatggacaacttgctagagacagtagat
gtgagagatggagtcaaggcaaaattctttctcaatatattaagcttatgtgagtcagct
ggggagaagctcctggttttcagccagtacctcacaccgttgaagtttttagaaagactt
gtgatgaaagaaaagggctggattttaggaaaagaaatctttgtgatctctggcgagtca
agttctgatcatcgggagtggtccatggagcgtttcaacaactccaccaatgctaaaata
ttctttgggtccattaaggcatgtggagaagggatatcactggtgggagcatctcggata
attatcttagatgttcaccttaatccttcagtaactcgccaggcgataggacgtgcattc
cgacctgggcaaacaaagaaagtgtatgcatataggttggtcgctgctgattcacctgaa
gaggaagatcataacacttgcttcaggaaggaagcaatcgcaaaaatgtggtttgagtgg
aatgaatactgtggttaccaggattttgcggtggggactgttgagttggatgacagtgga
gatcacttcttggaaagtccgccggtgagggaagatgtaagggttttgtataaaaggtag
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