Populus euphratica (Euphrates poplar): 105142041
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Entry
105142041 CDS
T05872
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105142041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105142041
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105142041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_16
Motif
Other DBs
NCBI-GeneID:
105142041
NCBI-ProteinID:
XP_011047795
UniProt:
A0AAJ6VIL4
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
METPLNILPLKRAAPNESRFNGNKRMKQMKEKVTDYSDPFAIHGLLDRLDSGRYGSVTDD
IRSLFNRKAQMIHTFLVMYPELANESRGRGMSFSEEKCNVIDLDDGDDDEGEGGNVAGGR
MPVVVIDSDDEVESNENRMAGHFQGIVLPKPEGQFLTDLMFSDHAERRIRGEVVSLTGEP
NITKDKGVYVGVEEDEVDTGIEDDGLGDIWKEMSFALESSKDVVENPQSDENMEEDEDYC
DHSFVLKDDIGYVCRICGVIEKAIDTIIEIQFNKVKRNARTYMSESRNAKDRDSNGMVGV
DLFEEDLMVTDIPAHPRHMKQMKPHQVEGFNFLRNNLVADNPGGCILAHAPGSGKTFMII
SFMQSFLAKYPHAKPLVVLPKGILSTWKKEFQIWQIEDIPLYDFYSVKADSRHQQLEVLK
QWLEHKSILFLGYKQFSSIVCDDGKNQVSVTCQEILLRRPSILILDEGHTPRNENTDVLQ
SLAKVQTPRKVVLSGTLYQNHVKEVFNVLNLVRPKFLRMDTSRGIVKRILSKVNIPGARK
QFKAGADAAFYDLVELTMQKNQDFKRKVTVIQDLREMTSKVLHYYKGDFLDELPGLVDFT
VVLNLSSKQKHEVQKLKKFAGKFKRSSVGSAVYLHPKLHSFSENSAVTDDMMDNLLETLD
VRDGAKAKFFLNILSLCESAGEKLLVFSQYLTPLKFLERLVMKVKGWILGKDIFVISGES
SSDHREWSMDRFNNSMDSKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAF
RPGQTKKVYAYRLVAADSPEEDDHTTCFRKEAIAKMWFEWNEYCGYQDFEVETVELDDSG
DCFMESSLVRDDVRVLYKR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggaaactccactgaacattttgcctctaaaacgcgcagctccaaacgagtcgcgtttt
aatggaaataagaggatgaaacagatgaaagaaaaagtaacggattactctgatccattt
gcaattcatggtttgcttgaccggttagatagtgggagatatggaagtgttacggacgat
atacgatcactttttaaccggaaagcgcaaatgatacatacctttttggttatgtatcct
gagcttgcgaatgagtcacgtggtcgagggatgagtttcagtgaggaaaagtgtaatgtg
attgatttggatgatggtgatgatgatgagggtgaaggtggaaatgttgctgggggaaga
atgccggttgtggttattgattccgatgacgaagtagagagtaatgagaataggatggct
gggcattttcaggggattgttttgccgaagcccgaggggcaatttcttactgaccttatg
tttagtgaccatgccgagagaagaattcgtggagaggtagtaagtcttactggtgaacct
aacatcacaaaagataaaggagtttatgttggtgtagaggaggatgaagttgatacaggg
attgaagacgatggcctaggagatatttggaaagagatgtcattcgcactggagtcttcc
aaggatgttgttgaaaatcctcaatctgatgagaacatggaagaagatgaagattattgc
gaccactcttttgtcttgaaggatgatattggttatgtttgtcgcatatgtggggttatt
gagaaagcaattgataccataattgagatccagtttaacaaggtcaaaaggaatgcaagg
acgtacatgtctgaatcccgcaatgccaaggaccgagattcaaatgggatggttggagtt
gatttgtttgaagaagatttgatggtaactgacatccctgctcatccaaggcacatgaag
cagatgaaacctcatcaagtggaaggtttcaattttcttcgcaataatttggtggcagat
aacccaggggggtgcatcttagcccatgctcctggatccggcaagacatttatgataatc
agtttcatgcaaagtttcctagccaaatatcctcatgcaaaaccattagtggtgcttcca
aaaggaatattgtctacatggaaaaaggagtttcagatatggcagattgaggatattcca
ctttatgatttttactctgttaaggcagacagtaggcatcagcaattggaggtcttaaaa
cagtggttggagcataagagtatccttttcttagggtacaaacagttctcctctatagtc
tgtgatgacgggaagaaccaggtgtcagtaacttgccaggagatattgttaaggagaccc
tcaattctaattttggatgaagggcacactccgaggaatgagaatacagatgtgctgcaa
tctctagccaaagtgcagacacctcgtaaagttgtgctttctggaaccctctaccaaaat
catgtcaaggaagtgttcaatgtattgaatctagttcgtcctaagtttctgaggatggat
acttcccgaggtattgtcaagcgcatcttgagtaaagtaaacattccaggtgcaaggaag
caattcaaagcaggtgcagatgcagctttctatgatctggtagagctcaccatgcagaaa
aaccaagattttaaaaggaaggtgactgttatacaagatctgcgtgagatgactagcaag
gttcttcattattataaaggagattttctggatgagcttccaggactagttgattttact
gtagtgctgaatctcagttccaaacagaagcacgaagtgcagaagttgaagaagttcgca
gggaagttcaagagaagttctgttgggagtgctgtttatctacacccaaagttgcactcc
ttctctgagaattctgctgtaactgatgatatgatggataacttgttagagacattagat
gtgagagatggagccaaggcgaagttctttctcaatatattaagcttatgcgagtcagct
ggggagaagctcctggttttcagccagtacctcacaccattgaagttcttagaaagactt
gtgatgaaagtaaagggctggattctgggaaaagatatctttgtgatctcaggtgaatca
agttctgatcatcgtgagtggtccatggaccgtttcaacaattccatggattctaaagtt
ttcttcgggtctattaaggcatgcggagaagggatatcattggtgggggcttctcgcata
atcatcttagatgttcatcttaatccttcagtaactcgccaggcaataggacgtgcattc
cgacctgggcaaacgaagaaagtgtatgcatataggctggttgctgctgattcaccagaa
gaggatgatcatactacttgcttcaggaaggaagccattgctaaaatgtggttcgagtgg
aatgaatactgtggttaccaggattttgaggtggagactgttgagttggatgacagtgga
gattgcttcatggaaagttcgctggtgagggatgatgtaagggttctgtataaaaggtag
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