Populus euphratica (Euphrates poplar): 20160420 Help Entry 20160420          CDS       T05872                                  Symbol rpoC2, KQ03_p078 Name (RefSeq) RNA polymerase beta' subunit   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism peu  Populus euphratica (Euphrates poplar) Pathway peu03020   RNA polymerase Brite KEGG Orthology (KO) [BR:peu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     20160420 (rpoC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:peu03021]     20160420 (rpoC2)    03400 DNA repair and recombination proteins [BR:peu03400]     20160420 (rpoC2) Enzymes [BR:peu01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      20160420 (rpoC2) Transcription machinery [BR:peu03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      20160420 (rpoC2) DNA repair and recombination proteins [BR:peu03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       20160420 (rpoC2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_3 Peptidase_M23 Motif Other DBs NCBI-GeneID:  20160420 NCBI-ProteinID:  YP_009054419 UniProt:  A0A076MKT6 LinkDB All DBs Position CP AA seq 1394 aa AA seqDB search MEVFMAERANLFFHNKVIDGTAIKRIISRFIDHFGMAYTSHILDQVKTLGFHQATATSIS LGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAIEKLRQSIEIWYATSEYLRQEMN PNFRMTEPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTRGISVSSRNGMIP ERIFIQTLIGRVLADNIYLGLRCIATRNQDIGIGLVNRFITFRTQPISIRTPFTCRSTSW ICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPS NGKIKFNKGLVHPTRTRHGHPAFLCSMDLYVTIESQDIIHNVTIPPKSFLLVQNDQYVES EQVIAEIRSGTYTLNFTERVRKHIYSDSEGEMHWSTDVYHASEFTYSNVHLLPKTSHLWI LSGGSCRSSIVPFSLHKDQDQINVHSLSVEKGYISNPSVNNDKVKHKFFSSYLSSKSKKK SRILDYSDLNRIICTGFIYPTILHENSDLLAKRRKNRFIIPFQSIQEKELMSHSDILIEI PINGIFRRNSIFAYFDDPQYRRKSSGITKYVAIGVHSIVKKEDLVEYRGVKEFQPKYQMK VDRFFFIPEEVYILPESSSLMVRNNSIIGVDTQITLNTKSRVGGLIRIERKKKKMELKIF SGDIHFPRATDKISRYSGILIPPGTVKTNSKESKKVKNWIYVQRITPTKKKSFVLVRPVL IYERGDGINLERLFPPDVLQEKENLKLRIVNYILYGNGKPIQGISNTSIQLVRTCLVLNW NQDKKSSSIEEARVYFVEVSINGLIRDFLRIHLGKSRISYISRKRNDPSGLGLISDNGPD RTNINPFYSIYSKTRIPQSLKQNQGTISISTLLNRNMECQSLIILSSSNCFRMGPSNGVK SYNVIKESTKRDPIIPIRNLLGPLGTALQIANFYSFYHLLTHNQISVIKYLKLDNLKLKQ TSKVLKYYLMDENGRIVNHDPYSNNVLNPFKLNWYFLHHNYHHNYCEETFTIINLGQFIC ENVCMTKNGPRLKSGQVLIVHADSVILRLAKPYLATPGATVHGHYGEILYEGDTLVTFIY EKSRSGDITQGLPKVEQVLEVRSIDSISINLEKRVENWNECITRIVGIPWGFLIGAELTI VQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRA ERAMRALEEAICYRTVFLGITRASLSTQSFISEASFQETARVLAKAALRGRIDWLKGLKE NVVLGGMIPVGTGFKGLAHRSSQHKIIPFKTKKKNLFEGEMRDILFHHRELFDSCISKNF YNISEQSFIGFNDS NT seq 4185 nt NT seq  +upstreamnt  +downstreamnt atggaggtatttatggccgaacgggccaatctcttctttcacaataaagtgatagatgga actgccattaaacgaattattagtcgattcatagatcacttcggaatggcatatacatca cacatcctggatcaagtaaagactctgggtttccatcaagccactgctacatctatttca ttaggaattgatgatcttttaacaataccttcgaaaggatggctagtccaagatgctgaa caacaaagtttgattttggaaaaacaccatcattatggaaatgtacacgcgatagaaaaa ttacgtcaatccattgagatatggtatgctacaagtgaatatttgcgacaagaaatgaat ccgaattttaggatgacggaaccctttaatccagtccatataatgtccttttcgggagct aggggaaatgcatctcaagtacaccaattagtaggtatgagaggattaatgtcggatcca caaggacaaatgattgatttacccattcaaagcaatctacgggaaggattgtctttaaca gaatatatcatttcttgctatggagcccgaaaaggagttgtggatactgctgtacgaaca tcagatgctggatatcttacgcgcagacttgttgaagtagttcaacacattgttgtacgt agaacagactgtggcaccacccgagggatttctgtgagttctcgaaatggaatgataccg gaaagaatttttattcaaacattaataggtcgtgtattagcagacaatatatatctgggt ctacgatgcattgccactcgaaatcaagatattgggattggacttgtcaatcgattcatc acctttcgaacacaaccaatatctattcgaactccttttacttgtagaagtacgtcctgg atctgtcgattatgttatggtcgaagtcctactcatggcgacctggtggaattgggagaa gctgtaggtattattgcgggtcaatccattggagagccgggtactcaactaacattaaga acgtttcataccggcggagtattcacagggggtactgccgaacatgtacgagccccctct aatggaaaaatcaaatttaataagggtttggttcatcccacacgtacacgtcatgggcat cctgcttttctctgttctatggacttatatgtaactattgagagtcaagatattatacac aacgtgactattccaccaaaaagttttcttttagttcaaaatgatcaatatgtagaatca gaacaagtgattgctgaaattcgctcgggaacatacactttgaattttacagagagggtt cgaaaacatatttattccgattcagaaggagaaatgcactggagtactgatgtataccat gcatctgaatttacatatagtaatgtccatcttttaccaaaaacaagccatttatggata ttgtcagggggttcgtgcagatccagtatagtcccgttttcgctacacaaggatcaagat caaataaacgttcattctctttctgtcgaaaaaggatatatttctaacccttcagtaaat aatgataaagttaaacacaaattctttagttcatatctttcgagtaaaagtaaaaaaaaa agtaggattcttgattattcagaccttaatcgaatcatatgtactggtttcatatatcct actatcctccacgagaattctgatttattggcaaagaggcgaaaaaatagatttatcatc ccattccaatcgattcaagaaaaagaactaatgtcccattccgatatcttgattgaaata cctataaatggcattttccgtagaaatagtatttttgcttattttgacgatccccaatac cgaagaaagagttcaggaattactaaatatgtggctataggggtgcattcaattgtcaaa aaagaagatttagttgagtatcgaggagtcaaagaatttcagccaaaataccaaatgaaa gtagatcgcttttttttcattcccgaggaagtgtatattttacccgaatcttcttcccta atggtacggaacaatagtatcattggagtcgatacacaaatcactttaaatacaaaaagt cgagtaggggggttgatccgaatagagagaaaaaaaaaaaaaatggaacttaaaatcttt tctggagatatccattttccgagggcgacagataagatatcccgatacagtggtatcttg ataccaccaggaacagtaaaaacaaattctaaggagtcgaaaaaggtgaaaaattggatc tatgtccaacggatcacacctaccaagaaaaagtcttttgttttggttcgaccagtactc atatatgaaagaggggacggtataaatttagaaagactttttccgccggatgtattgcag gaaaaagagaatctgaaacttcgaattgtcaattatattctttatggaaatggtaaacca attcagggaatttctaacacaagtattcaattagttcgtacttgtttagtgttgaattgg aaccaagacaaaaaaagttcttctatcgaagaggctcgtgtttattttgttgaagtaagt ataaatggtttgattcgtgatttcctaagaatccacttagggaaatcacgcatttcctat atcagcagaaaaaggaacgatccatcaggtttgggattgatctctgataatgggccagat cgcaccaatattaatccgttttattccatttattccaagacaaggattccacaatcgctt aaacaaaatcaaggaactattagtattagtacgttgttgaatagaaatatggaatgtcaa tctttgataattttgtcatcatctaattgttttcgaatgggtccatccaacggtgtaaaa tcttataatgtaataaaagaatcaactaaaagagatcctataattccaattaggaatttg ttgggccctttaggaacagcccttcaaattgcgaatttttattcattttaccatttacta actcataatcagatctcggtaattaaatatttgaaacttgacaatttaaaattaaaacag acttcaaaagtactaaaatattatttaatggatgagaacggtagaattgttaatcacgat ccgtacagtaacaacgttttgaatccattcaaattgaattggtattttctccatcataat tatcatcataattattgtgaagaaacattcacaataattaacctgggacagtttatttgt gaaaatgtatgtatgacaaaaaacggaccacgcctaaaatcaggtcaagttctaattgtt cacgccgactctgtaatactaagattggctaagccctatttggccactccaggagcaact gttcatggccattatggggaaatcctttacgaaggagatacattagttacatttatatat gaaaaatcgagatctggtgatataacgcagggtcttccaaaagtggaacaggtgttagaa gtgcgctcaattgattcaatatcgataaacctagaaaagagagtggagaattggaacgag tgtataacaagaattgttggaattccttggggattcttgattggtgctgagctaactata gtgcaaagtcgtatttccttggttaataagatccaaaaggtttatcgatcccagggggta cagatccataataggcatatagaaattattgtacgccaaataacatcaaaagtcctggtt tcagaagatggaatgtctaatgttttttcacccggagaactaattggattgttgcgggcg gaacgagcgatgcgcgctttggaagaagcgatctgttaccgaaccgtattcttgggaata acgagagcatctctgagtactcaaagtttcatatccgaagcgagttttcaagaaactgct cgcgttttagcaaaagcagctctccgcggtcgtatcgattggctgaaaggcctgaaagaa aacgtcgttctaggtggtatgatacccgttggtaccggattcaaaggattagcgcaccgc tcaagccaacataagatcattcctttcaaaaccaaaaagaagaatttattcgagggggaa atgagagatattttgtttcaccacagagagttatttgattcttgcatttcaaaaaatttc tataatatatcagaacaatcatttataggatttaacgattcctaa

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