Pseudomonas eucalypticola: HWQ56_16755
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Entry
HWQ56_16755 CDS
T07251
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pez
Pseudomonas eucalypticola
Pathway
pez03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HWQ56_16755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pez03400
]
HWQ56_16755
DNA repair and recombination proteins [BR:
pez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HWQ56_16755
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
DDRGK
Motif
Other DBs
NCBI-ProteinID:
QKZ05351
UniProt:
A0A7D5HY16
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All DBs
Position
complement(3778620..3779474)
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AA seq
284 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVSLTTAVSSERIDFDWLDKRSMDPVGYKRINKVTGKDIDKDN
IVKGVEYEKGRYVVISEDEIRKARPEATQTIDIFSFVEAQEIPLQAFDTPYYLAPDKRGG
KVYALLRQTLESTGKVALARVVLHTQQHLALLRPLEDALVMITLRWPAQVRGLEGLELDS
SVTDAKIDKRELQMAKRLVEDMSGTWTPEEYQDDFKQTIMDLVEEKASKGKIATVTSLDE
EGEQKGADIIDLTDLLKRSLAGKKPAPAKKTEAPAKRTTRKKAS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagccatctggaaaggcgcgatcagcttcggcctggtgcacattcccgtgtcc
ttgaccaccgcggtgtccagcgaacgcatcgatttcgactggctggacaagcgcagcatg
gatccagtgggttacaaacgcatcaacaaggtgaccggcaaggacatcgacaaggacaac
atcgtcaagggtgtcgaatacgaaaaaggtcgctacgtggtgatcagcgaggacgagatc
cgcaaggcgcggccggaagccacccagaccatcgacatcttttctttcgtcgaagctcag
gagattccgctgcaggccttcgacacgccgtattacctggcccccgacaagcgcggtggc
aaggtgtacgcgctgttgcgccagaccctggaaagcactggcaaagtggccttggccagg
gtggtcctgcatacccagcagcacctggccttgctgcgcccgctggaagacgcgctggtg
atgattaccttgcgctggcccgcgcaggtacgcggcctcgagggcctggagttggacagc
agtgtgaccgacgccaagatcgacaagcgcgagttgcagatggccaagcggctggtggag
gacatgagcggtacctggacgcccgaggaataccaggacgacttcaagcagaccatcatg
gacctggtggaagaaaaggccagcaaaggcaagatcgccacggtgacatccctggacgag
gaaggcgaacagaagggcgccgacatcattgacctgaccgacctgctcaaacgcagcctg
gccggcaagaaaccggcgccggcgaagaaaaccgaagcgccagccaaacgcacgacgcgc
aagaaagcgtcctga
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