Plasmodium falciparum 3D7: PF3D7_0219600
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Entry
PF3D7_0219600 CDS
T00095
Name
(RefSeq) replication factor C subunit 1, putative
KO
K10754
replication factor C subunit 1
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03030
DNA replication
pfa03410
Base excision repair
pfa03420
Nucleotide excision repair
pfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PF3D7_0219600
03410 Base excision repair
PF3D7_0219600
03420 Nucleotide excision repair
PF3D7_0219600
03430 Mismatch repair
PF3D7_0219600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfa03032
]
PF3D7_0219600
03400 DNA repair and recombination proteins [BR:
pfa03400
]
PF3D7_0219600
DNA replication proteins [BR:
pfa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PF3D7_0219600
DNA repair and recombination proteins [BR:
pfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PF3D7_0219600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_30
AAA_14
AAA_assoc_2
BRCT_2
AAA_22
PTCB-BRCT
AAA_16
AAA_18
Sigma54_activ_2
Gp44_lid
AAA_19
RuvB_N
AAA_5
PK_C
AAA_33
VD10_N
Motif
Other DBs
NCBI-GeneID:
812779
NCBI-ProteinID:
XP_001349697
PlasmoDB:
PF3D7_0219600
UniProt:
O96271
LinkDB
All DBs
Position
2:complement(779418..782132)
Genome browser
AA seq
904 aa
AA seq
DB search
MSSKDKNLFSDDESDDGRKKKRLKKVSSSLFHDDDDDNFISNKKVEKSKSKKKSDAIYID
DNESNNNNNYNNTNKSSNRKSLENKSSKTSPKFYDITSFFKPSSKKLEDNNTMKKSNSKE
DEKLVVNNLNDYFNILQNDNKVTKEDTKSNNVSPKNEINKSNVKRERESEQYEISSENDT
VSSKKNVLISPAKKQKTQNNNNEDLQKFDYLPFHNQKFVITGVFKNFTRDELQSKIKEHG
GSVMTAVSTKTNYLVHGEYLEDGRLFNEGRKYTKAFELQQQNKSNIKILNEEELLKLLPQ
TDQTQENDKTYASDTIKTENKDKNYNYEKKDKNYNYEKKDTHNTQNEILNQLWVEKYRPK
NLNELVGNNQNVIKLQNWLASWEDVCIKGIKKPAQKTFRGIFENVNARCALLSGPAGIGK
TTTAKIVSEASGYNVIEFNASDERNKAAVEKISEMATGGYSIMSLNNRKLTKTCIIMDEV
DGMSSGDKGGSTAILKLIEKTKCPIICICNDRQNNKMRTLANKCYDLKFSMPQKNSVVKR
LLEICKKEGIMMEPNALELLWESTCGDIRQMLNTLQLLSKTYTRIQFLDLKKELNNSNKN
IQSLANPFEITLKLLNFNESSKLNIREIMDLFFVDYELIPYFISENYTNVFNETDKSSAS
LNKWNVFSQIAHDLSLADKIKYNMKSNMDFALLPHFAILSCVCPVMRIKILKSFMSGRVN
FPTAFGKISTFNKNKRLLNELCFNLSYKLNVCPKYMVTSGFLNYIYFKIMTPLHKADVNQ
AIQIMEEYSITREMVTENLPCLRLPNQENLYDKLDTKLKSSFTRLYNSSHVIKIDPNSMK
KGLKSSEKKTTFKLNEFESDEDIDELSESKEDKDDDVLIKTKIDRKGTLKTKPSTKVKSM
KKAK
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaaggacaaaaacttattcagcgatgacgaaagcgatgatggtaggaaaaag
aagaggctgaaaaaagtatctagttccttattccatgatgacgatgatgataattttata
agtaataaaaaagtggaaaaatccaaatcgaaaaaaaaaagtgacgctatatatattgat
gataatgaaagcaataataataacaattataataatactaataaaagtagtaataggaaa
tcattagaaaataaatcatcgaaaacgtcaccgaaattttatgatataacatcctttttt
aaaccctcttcaaaaaaacttgaggataataacactatgaagaaatctaatagtaaggaa
gatgagaaactcgttgtgaataatcttaatgactattttaatatattacaaaatgataat
aaggtcactaaagaagacacaaaaagtaacaacgttagtcctaaaaatgaaatcaataaa
tcaaatgttaaaagagaaagagaaagtgaacaatatgaaattagtagtgaaaacgataca
gtttcaagtaaaaaaaatgttcttatatctcctgcaaaaaaacaaaaaactcaaaataat
aataatgaagatttacaaaaatttgattatttaccttttcataatcaaaaatttgtaatt
acaggagtattcaaaaattttacaagagatgaattacaatctaaaattaaagaacatgga
ggtagtgtaatgacagctgtatcgactaaaacgaattatctagtccatggggaatatcta
gaagatggaagattatttaacgaaggtagaaaatatactaaagcttttgaattacaacaa
caaaacaaatctaatatcaaaatattaaatgaagaagaacttttgaaattattaccacaa
actgatcaaacacaagaaaatgataaaacatatgcatctgatacaattaaaacggaaaat
aaagataaaaattataattatgaaaagaaagataaaaattataattatgaaaagaaagat
acacataatacacaaaacgaaattcttaatcaattgtgggtagaaaaatatagacctaaa
aatctcaacgaattagtaggtaataatcaaaatgtaataaaattacaaaattggcttgct
agttgggaagatgtatgtattaaaggaataaagaaaccagcacaaaaaacatttagagga
attttcgaaaatgtaaatgcaagatgtgctttattaagcggtccagcaggaataggaaaa
actactacagccaaaattgtttcagaagcatctggttataatgttatcgaatttaatgca
tctgatgaaagaaataaagctgccgttgaaaaaattagtgaaatggctacaggtggatat
tccataatgtcattaaataatcgtaaattaacaaaaacttgtattattatggatgaagta
gatggtatgtctagtggtgataaaggtgggagtacagccatattgaaattaatagaaaaa
acaaaatgtccaataatatgtatatgtaatgatagacaaaataataagatgagaacatta
gcaaataaatgttatgatttaaaatttagtatgcctcaaaaaaatagtgttgttaaaaga
ttattagaaatatgtaaaaaagaaggaatcatgatggaaccaaatgctttggaattatta
tgggaaagtacatgtggtgatataagacaaatgttgaatactttacaattattatctaaa
acatatacaagaatacaattcttggatttaaaaaaagaattaaataattctaataaaaat
atacaatcattagcaaacccatttgaaattacattaaaattattaaattttaatgaatca
tccaaattaaatataagagaaattatggatcttttttttgttgattatgaattaattcca
tattttattagtgaaaattatacaaatgtttttaatgaaacagataaatcatctgcatct
ttaaataaatggaatgtattctcacaaattgcacatgatttatcattagctgataaaatt
aaatataatatgaaatcaaatatggattttgctctattacctcatttcgctattttatca
tgtgtttgtccagttatgagaataaaaatattaaaatcatttatgtctggaagagttaat
ttcccaacagcatttggtaaaatttccacatttaataaaaataaaagattactaaatgaa
ctatgttttaatctatcatataaattaaatgtatgccctaaatatatggtcacatcagga
ttcttaaattatatctattttaaaattatgacacctttacataaagcagatgtaaatcaa
gctatccaaattatggaagaatacagtattacgcgagaaatggtaaccgaaaatttacct
tgccttagattaccaaatcaagaaaacctatatgataaactagatacaaaacttaaatca
tcctttaccagactttataactcttcacatgttatcaaaattgatcctaattctatgaaa
aaaggattaaaatcaagtgaaaaaaaaacaacatttaaattaaatgagttcgagtctgac
gaagatatagatgaactaagtgaatccaaagaagacaaggatgatgatgttctaatcaaa
acaaaaatagacagaaagggtaccttaaaaacaaaaccttctacaaaagtaaaatctatg
aaaaaagcaaaataa
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