Pseudomonas synxantha LBUM223: VO64_3403
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Entry
VO64_3403 CDS
T03769
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VO64_3403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_3403
Enzymes [BR:
pfb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
VO64_3403
DNA repair and recombination proteins [BR:
pfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VO64_3403
Prokaryotic type
VO64_3403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AKA83949
LinkDB
All DBs
Position
complement(3820640..3821707)
Genome browser
AA seq
355 aa
AA seq
DB search
MRDEQFSAAVLDWYDRHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMASLP
TVEALAAAPEDEVLHLWTGLGYYTRARNLQKTAKIVVNEYGGEFPRDVEKLTELPGIGLS
TAGAIASLSMGLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPFERVNAY
TQAMMDMGATLCTRSKPSCLLCPLEKGCEAHMLGLETRYPIPKPRKAIPQKRTLMPMLAN
SEGAILLYRRPSTGLWGGLWSLPELDDLEDLDHLANQHALQLGKHQELPGLIHTFSHFQL
AIEPWLVQVEESAHHVAEADWLWYNLATPPRLGLAAPVKTLLKRAADVLNAGVSS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgagcagttttcagcggcggtactcgattggtacgaccgccacggccgtcat
gacctgccctggcagcagggcatcacgccttaccgggtgtgggtgtcggagatcatgctg
caacagacccaggtcagcaccgtgctcaattacttcgaccggttcatggcgtctctgccg
acagtcgaagccctggcggccgcgccggaagacgaagtgctgcacctgtggaccggcctg
ggctactacacccgggcgcgcaacctgcagaagaccgccaagatcgtggtgaacgagtac
ggcggcgagtttccccgcgacgtggaaaagctcaccgagctgcccggtatcggcctgtcc
accgctggcgcgattgccagcctgagcatgggcctgcgcgcgccgatcctcgatggcaac
gtcaagcgcgtgctggcacgctttaccgcgcaggagggctacccgggcgagcccaaggtg
gccaaacaactgtgggccaccgcagagcgcttcacaccctttgagcgcgtcaacgcctac
acccaggcgatgatggacatgggtgccaccctttgcacccgcagcaaacccagctgcctg
ctgtgcccgctggaaaaaggctgcgaagcccatatgctaggcctggagacacgctacccg
atccccaagccgcgcaaggccatcccgcaaaagcgcacgctgatgccgatgctggcgaac
agcgagggcgcgattctgctctaccgtcgcccttccacgggcttgtggggcggtttgtgg
agcttgccggaactggacgacctggaggacctcgatcacctggccaaccagcacgcgctg
caactgggcaagcatcaggagctccccggactgatccacaccttcagccacttccagttg
gccatcgaaccctggctggtccaggtcgaggaatccgcccatcacgtggccgaggccgac
tggctctggtataacctcgccaccccgccgcgcctgggccttgccgccccggtgaaaaca
ttgctcaagcgcgcggccgacgtattgaacgcaggagtttcgtcatga
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