Pseudomonas synxantha LBUM223: VO64_4064
Help
Entry
VO64_4064 CDS
T03769
Name
(GenBank) Alginate lyase precursor
KO
K01729
poly(beta-D-mannuronate) lyase [EC:
4.2.2.3
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb00051
Fructose and mannose metabolism
pfb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
VO64_4064
Enzymes [BR:
pfb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.3 mannuronate-specific alginate lyase
VO64_4064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alginate_lyase
Motif
Other DBs
NCBI-ProteinID:
AKA84610
LinkDB
All DBs
Position
complement(4569981..4571090)
Genome browser
AA seq
369 aa
AA seq
DB search
MQKLLIPSLLGLAIFAGAANAAAPLRPPQGYFAPIEAFKTGDFKNDCDAMPAPYTGSLQF
RSKYEGSDKARSTLNVQSEKAFRDSTADITKLEKDTSKRVMQFMRDGRPQQLECTLNWLV
SWAKADALMSKDFNHTGKSMRKWALGSMASAYVRLKFSESQPLAKHPQESQQIEAWFNKL
ADQVVSDWDNLPLEKTNNHSYWAAWSVMATSIATNRRDLFDWAVKEYKVGANQVDAQGFL
PNELKRQQRALSYHNYALPPLSMIASFALVNGVDLRQENNGALKRLGDKVLAGVKDPEIF
EQKNGKEQDMKDLKEDMKFAWLEPFCTLYTCAPDVIERKHEMQPFKTFRLGGDLTKVYDP
AHEKGKKGS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagttattgattccatcgttgctgggcctggcgatcttcgccggggccgccaac
gccgccgcgccactgcgtccgcctcagggctatttcgcaccgatcgaagcgttcaagacc
ggcgacttcaagaatgactgcgacgccatgccagcgccgtacaccggttcgctgcaattt
cgcagcaagtacgaaggttcggacaaggcgcgctccacgctgaatgtgcagtccgaaaag
gcctttcgcgacagcaccgccgacatcaccaagctggaaaaagacaccagtaagcgcgtg
atgcagttcatgcgtgacggccgcccccagcagctcgaatgcacgctgaactggctggtg
tcgtgggccaaggccgacgcgctgatgtccaaggacttcaaccacaccggcaaatccatg
cgcaaatgggcactgggcagcatggcttcagcctatgtacgcctgaaattctccgagtcg
cagccgctggccaagcacccgcaggaatcccaacagatcgaagcctggttcaacaagctg
gccgaccaggtggtaagcgactgggacaacctgccgctggaaaaaaccaacaaccactcc
tactgggccgcctggtcggtgatggcaacctccatcgccaccaaccgccgcgacctgttt
gattgggcggtgaaggaatacaaggtcggcgccaaccaggtcgatgcccaaggctttttg
ccgaacgagttgaagcgccaacaacgcgccctgtcgtatcacaactacgccctgccgccg
ctgtcgatgatcgccagttttgccctggtcaacggcgtggacctgcgccaggaaaacaac
ggcgcgctcaagcgcctgggcgacaaggtgctggccggggtgaaagacccggagatcttc
gagcagaagaacggcaaagagcaggacatgaaggacctcaaggaagacatgaaatttgcc
tggcttgagcccttctgcacgctctacacctgcgcgccggatgtgatcgagcgcaagcat
gagatgcagccgttcaagacgttccgcctgggtggcgacctgaccaaggtctacgacccg
gcgcacgaaaaaggcaaaaaaggttcctga
DBGET
integrated database retrieval system
