Pseudomonas ogarae: PSF113_4240
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Entry
PSF113_4240 CDS
T01734
Symbol
sucA
Name
(GenBank) SucA
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pfe
Pseudomonas ogarae
Pathway
pfe00020
Citrate cycle (TCA cycle)
pfe00785
Lipoic acid metabolism
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01120
Microbial metabolism in diverse environments
pfe01200
Carbon metabolism
pfe01210
2-Oxocarboxylic acid metabolism
Module
pfe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSF113_4240 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PSF113_4240 (sucA)
Enzymes [BR:
pfe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PSF113_4240 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AEV64236
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Position
complement(4966545..4969376)
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AA seq
943 aa
AA seq
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MQESVMQRMWNSAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGNSATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSITHYGLTNADLDTTFRAGDLFIGKEEASLREIHEALQQTYCRTIGAEFTHIT
DSEQRQWFQQRLESVRGRPTYSADIKSHLLERVTAGEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEIVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKKVELGSGD
VKYHQGFSSNVMTTGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDPTGEKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPEDSRSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQYKRDVVIDLVCYRRRGHNEADEPSGTQPLMY
QQIAKQRTTRELYAERLTQGGVLDAARVQEKVDEYRNALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLLEIPEGFVVQRQVAKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRITGQDVGRGTFSHRHAALHNQKDASTHIPLQHLYKGQPRF
DLYDSLLSEEAVLAFEYGYSTTEPNALVIWEAQFGDFANGAQVVVDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNVQVCVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAISTLEDLAEGSFQTVISEIDTLDAAKVTRLVLCSGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEEDLMEAIAPYTNLTHVVWCQEEPMNQGAWYSSQHHLRRS
IGNHNKALGLEYAGRDASAAPACGYASMHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtggaacagtgcccacctctccggtggtaacgct
gcctatgtggaagagctctacgagctctacctgcacgaccctaacgctgtgccagaagaa
tggcgcacctactttcagaagttgccggctgacggtaactctgccactgatgtttcgcac
tcgacgattcgcgatcatttcgtgttgctggcaaagaaccagcgccgcgctcaaccggta
tctgccggcagcgtgagcagtgaacacgagaagaagcaagttgaagtgctgcgactgatc
caggcctaccggatgcgaggccaccaggcagcccagctcgacccgctggggctgtggcag
cgtcctgcacctgcagacctgtcgatcactcattacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaagcgagcctacgcgaaatt
cacgaagcgttgcagcagacatattgccgcaccattggcgctgaattcacgcacatcacc
gattccgagcagcgccagtggttccagcagcgtctggaaagcgttcgtggccgtccgacg
tactccgccgatatcaagagccacttgctcgagcgcgtcaccgccggtgaaggcctggag
aagtacctgggtaccaaatacccgggcaccaagcgttttggcctggaaggtggtgaaagc
ctgattccgatgctggacgagctgatccagcgttcgggttcctacggcaccaaggaaatc
gtcatcggcatggcccaccgtggtcgtctgaacgtactggtcaacaccttcggcaagaac
ccgcgcgagttgttcgacgagttcgaaggcaagaagaaggtcgagctgggttccggtgac
gtgaaataccaccagggcttctcgtccaacgtgatgaccacaggtggcgaagtgcacttg
gccatggccttcaacccgtcccacctggaaatcgtttccccggtggtcgagggttcggtc
cgtgcccgccaggatcgccgcaacgacccgaccggtgaaaaggtcctgccgatttccatc
cacggtgacgcggcattcgccggtcaaggcgtggtcatggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggtaccgtgcacatcgtgatcaacaaccaggtcggtttc
accatcagcaacccggaagactcgcgctccaccgagtacgcaaccgacgtcgcgaagatg
atccaggcgccgattctccatgtgaatggcgatgacccggaagccgtgctgttcgtgacc
cagttggccatcgactaccgcatgcagtacaagcgcgacgtggtgatcgacctggtctgc
taccgccgtcgcggccacaacgaggccgacgagccaagcggcacccagccgctgatgtac
cagcagatcgccaagcagcgcactactcgtgagctgtatgccgagcgcctgacccagggc
ggcgtgctggatgccgcgcgcgtccaggaaaaagtcgatgaatatcgcaatgccctggat
aacggcctgcacgttgtaaaaagcctggtcaaagagccgaacaaagagctgttcgtggac
tggcgtccatacctgggccacgcctggaccgcgcgtcacgacacccgtttcgacctcaag
accctgcaggaactgtccgccaagctgctggagatcccggaaggcttcgtggttcagcgc
caggttgcgaaaatctacgaagaccggcagaagatgcaagccggcggcctgccgatcaac
tggggttacgccgaaaccatggcgtacgcgaccctggcgttcgaaggtcacccgattcgc
atcaccggccaggacgtaggccgcggcactttctcgcaccgccacgcggcgctgcacaac
cagaaagacgccagcacccacatcccgctgcaacacctgtacaaaggccagccacgtttc
gacctgtacgattcgctgctgtccgaagaagccgtcctggcgttcgaatatggctactcc
accaccgagccaaatgcgctggtgatctgggaagcccagttcggcgacttcgccaacggt
gcccaggtggttgtcgaccagttcatcaccagcggcgagcacaagtggggccgtctctgc
ggtctgaccatgctgttgccacacggttatgaagggcaggggccggagcactcttcggca
cgtctggagcgttacctgcagctgtgcgccgagcacaacgtccaggtctgcgtaccgacg
actccggcgcagatctaccacctgctgcgtcgtcaagtcatccgtccgctgcgcaagccg
ctgatcgtgctgacaccgaagtcgctgctgcgtcacaaactggcgatctccacgctcgag
gatctggccgaaggctcgttccagaccgttatttcggaaatcgacaccctggatgcggcg
aaggtcactcgcctggtcctgtgcagcggcaaggtctactacgacctgctggaaaaacgt
cgtgccgaaggccgcgaagacatcgccatcgtgcgtatcgagcagctttacccgttcccg
gaagaagacctgatggaggccatcgcgccttacaccaacctcacccatgtggtgtggtgt
caggaagaaccgatgaaccaaggcgcgtggtacagcagccagcatcacctgcgtcgcagc
atcggcaaccataacaaggccctgggcctggaatatgccggccgtgatgcgtctgctgca
cctgcgtgtggttatgcgtcgatgcacgccgagcagcaggaaaaactgctgcaagatgcc
ttcactgtttaa
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