Pseudomonas ogarae F113: PSF113_5918
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Entry
PSF113_5918 CDS
T01734
Symbol
gidA
Name
(GenBank) GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
pfe
Pseudomonas ogarae F113
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfe03016
]
PSF113_5918 (gidA)
03036 Chromosome and associated proteins [BR:
pfe03036
]
PSF113_5918 (gidA)
Transfer RNA biogenesis [BR:
pfe03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PSF113_5918 (gidA)
Prokaryotic type
PSF113_5918 (gidA)
Chromosome and associated proteins [BR:
pfe03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PSF113_5918 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
HI0933_like
Thi4
Pyr_redox
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AEV65893
UniProt:
A0ABN5GGC5
LinkDB
All DBs
Position
complement(6839441..6841339)
Genome browser
AA seq
632 aa
AA seq
DB search
MDFPSRFEVIVIGGGHAGTEAALASARMGAKTLLLTHNVETLGAMSCNPAIGGIGKSHLV
KEIDALGGAMAMATDKGGIQFRVLNSRKGPAVRATRAQADRVLYKAAVREILENQPNLWI
FQQAADDLIVEQDQVRGVVTQMGLRFFADSVVLTTGTFLGGLIHIGLQNFSGGRAGDPPS
IALAHRLRELPLRVGRLKTGTPPRIDGKSVDFSVMTEQPGDTPIPVMSFMGNKEQHPRQV
SCWITHTNARTHEIIAANLDRSPMYSAAGEIEGVGPRYCPSIEDKIHRFADKESHQVFIE
PEGLTTHELYPNGISTSLPFDVQLQIVQSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLE
TKAIGGLFFAGQINGTTGYEEAGAQGLLAGANAALLAKGKDAWCPRRDEAYIGVLVDDLI
TLGTQEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDMRWAAFCKKRESIELEEQ
RLKSTWVRPGTEQGDAIAAKFGTPLTHEYNLLNLLSRPEIDYVGLVEVTGQGAEDPQVAE
QVEIKTKYAGYIDRQQDEIARLRASEDTKLPVDIDYTGISGLSKEIQSKLGATRPETLGQ
ASRIPGVTPAAISLLMIHLKKRGAGRQLEQSA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
gtggatttcccttcccgttttgaagtgatcgtcatcggcggcggtcatgccggtaccgag
gcagcacttgcatcagcacgcatgggggcaaaaaccctgttgctgacgcataacgtggaa
accctcggcgccatgagctgcaaccctgccattggtgggatcggcaaaagccacctggtc
aaggaaatcgatgcccttgggggcgcgatggccatggccaccgataaaggtggtatccag
tttcgcgtgttgaatagccgtaaaggcccggccgtgcgcgctactcgcgcccaggccgac
cgcgtcctgtacaaggccgctgtccgtgaaatcctggaaaaccagccgaacctgtggata
tttcaacaagcggccgatgacctgatcgtcgagcaggaccaggtgcgcggtgtcgtcacg
caaatgggcctgcggttcttcgccgattccgtggtgttgaccaccggtaccttcctcggc
ggacttatccacattggtttgcagaatttttccggcggtcgcgccggtgatccgccgtcg
attgctctggctcaccgtctacgtgagttgccattgcgtgtcgggcgtctgaaaaccggt
acgccacctcgcatcgacggcaagtccgtggatttctcggtgatgactgaacagcctggc
gatacgcctatcccggtgatgtcgttcatgggcaacaaggaacagcatccacggcaagtc
agttgctggatcacccacaccaacgcccgcacccacgaaatcatcgcggcgaacctcgat
cgttcgccgatgtattccgctgccggtgaaatcgaaggtgttggcccgcgctattgcccg
tcgattgaagacaagatccatcgctttgccgacaaggaaagccatcaggtgttcatcgaa
ccggaaggtttgaccacccatgagttgtatccgaacgggatatccacaagtctgccgttc
gacgtgcaactgcagatcgtgcagtcgattcgcggcatggaaaacgcgcacatcgtgcgt
ccaggttatgcgattgagtacgactacttcgatccgcgcgatttgaagtacagcctggaa
accaaagcgatcggcggtctgttcttcgccgggcagatcaacggcaccaccggctatgaa
gaagctggtgcccagggtttgctcgccggagccaacgccgcactgctcgccaagggcaaa
gacgcctggtgcccgcgtcgcgatgaggcgtacatcggtgtgctggtggatgacctgatt
accctgggtacccaggaaccgtatcggatgttcacgtcccgcgccgaataccgcctgatc
ctgcgtgaagacaacgctgacctgcgcttgaccgagaaaggtcgcgaactgggattggtg
gacgacatgcggtgggccgcgttctgcaagaaacgcgagagcatcgagctggaagagcaa
cgcctgaaaagcacctgggttcgtcccggtactgagcagggcgatgccatcgcggcgaaa
ttcggcacaccgctgacccacgaatacaacctgctgaacctcttgagccgtccggaaatc
gattacgtcgggctggtggaagtgaccggccagggcgccgaagatccacaggtggccgaa
caggtcgagatcaagaccaagtacgccggttacatcgaccgccagcaggacgaaatcgcc
cgtctgcgcgccagtgaagacaccaagctgcctgtggatatcgattacaccggcatttcc
gggttgtcgaaggaaatccagagcaagctcggtgcgacccgtccagagaccctgggccag
gcttcgcgcattcccggcgtcacgccggcggcgatttccctgttgatgattcatttgaaa
aaacgcggcgccggccgccagttggagcaaagcgcttga
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