Paludibaculum fermentans: IRI77_22480
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Entry
IRI77_22480 CDS
T06895
Name
(GenBank) 5-oxoprolinase/urea amidolyase family protein
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00220
Arginine biosynthesis
pfer00791
Atrazine degradation
pfer01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
IRI77_22480
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
IRI77_22480
Enzymes [BR:
pfer01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
IRI77_22480
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
HlyD_3
RimK
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
QOY85583
UniProt:
A0A7S7SID3
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All DBs
Position
5711246..5714686
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AA seq
1146 aa
AA seq
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MIRKVLIANRGAIACRIIRTLRRMGIASVAVYSEADKHSLHVHQADEAVLIGPPPPQQSY
LDVDAVLDAARRTGAEAIHPGYGFLSENASFAEACAAAGIIFIGPTPRQMVEFGLKHRAR
ELAQACGVPLLPGTPLITEAKAAAEVGFPLMLKSTAGGGGIGMRLCHTEAELEDAFAAIE
RLSRANFKDSGIYAERFVEHARHIEVQIFGDGQGRVVALGERDCSAQRRNQKVIEETPAP
GLTAAVRKALFDSAIRLGKEVSYQSAGTVEFIYDSDRGEFYFLEVNTRLQVEHGVTEEVT
GTDLVEWMVRLAGGEDPIREVTPQGASIQVRVYAESPLKNFQPSAGLLTDVQFPSDARVE
TWVETGTDIPPYYDPLVAKIITHGADRAEALQRMRAALSSTSLAGIETNVDYLRAICAEP
RFQAGGFPTKFLGEFHYAPRLTEVIDGGTQTSVQDYPGRLGYWAIGVPPSGPMDWKSFTE
ANELVGNKASAAALECTLIGPTLKFHSSAVIALTGADMEATLDGAPVPRWQPVEVRAGSI
LEMGAVSGPGARAYLAMRGGIDVREYLGSRSTFILGRFGGPAGRVLRTGDLLHYGTAVAA
EPQPARPVPQFDHHWKIGVTYGPHGAPDFFTDRDIDRFFETDWKVHYNSDRTGVRLIGPK
PEWARPDGGEAGLHPSNIHDNAYAVGTVDFTGDMPIILGPDGPSCGGFVCPATIVHDELW
KIGQLKAGDTVHFQRVNAEPAILQQAPGVVVRADGDRNLLVEFGEAHLDFGLRLKAQAMA
DWIRQQSLNGVVDLTPGIRSLQIHYDTARIRREEILEAVSASAASAQNVEEVPSRTVYLP
LSWDDPATRLAIEKYMRSVRPDAPWCPWNIEFIRRINGLGSVDDVHRIVFDASYLTLALG
DVYLGAPVATPIDPRHRLVTTKYNPARTWTPENAVGIGGAYLCVYGMEGPGGYQFVGRTI
QMWNTWRTTDSFTQGKPWLLDFFDQIRFYPVSAKELLEMREGFPHGEYTVRTEPGVFNLA
QYQSFMQSIAGEAAAFKATQQEAFHAERERWAAAGLAEHIEEPVPVAPPEESVPEGCRSI
RSPITASVWKIQAEPGQKLKAGDPLVVLEAMKMEVAVPAPAACEVVEIRCAPGAIVHPGQ
ALMVVR
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
gtgatccggaaagttctgattgccaatcgtggcgccatcgcgtgccgcatcatccgaacc
ctgcgccgcatgggcatcgcctcggtcgccgtctattcggaagcagacaagcactcgctg
cacgtccaccaggccgacgaggcagtcctgatcggccctccgccgccgcagcaaagctac
ctcgatgtcgacgccgtcctcgacgcagcgcgccgcaccggagccgaagccatccatccc
ggctacggcttcctgagtgagaacgcctccttcgccgaagcctgcgccgccgccggcatc
atcttcatcggacccacgccgcggcagatggtcgagttcggcctgaaacaccgcgcccgg
gaactggcgcaggcctgcggagtgcctctcctccccggcacgcccctcatcacggaagcc
aaagcggcagccgaagtcggcttccccctgatgctcaaatccaccgccggtggtggcggc
atcgggatgcgtctctgccacaccgaggccgaactcgaagacgccttcgcggccatcgaa
cgcctcagccgcgcaaacttcaaggactccggcatctacgccgagcgcttcgtcgaacac
gcccgccacatcgaggtccagatcttcggcgacggccaaggccgcgtcgtcgccctcggg
gaacgcgactgttccgcccagcgccgcaatcagaaggtcatcgaggagacgcccgcgccc
ggcctcaccgctgcggtccgcaaagccctcttcgactccgccatccgcctgggcaaggag
gtctcctaccagtccgccggcacggtcgaatttatctacgacagcgatcgcggtgagttc
tacttcctcgaagtgaatacccgcctgcaggtggagcacggcgtcaccgaggaagtcacc
ggaaccgatctcgtcgaatggatggtccgcctcgccggaggcgaggatcccatccgcgaa
gtcacgccccaaggcgcctccatccaggtgcgcgtctacgctgaatcgcccctcaagaac
ttccaacccagtgcgggcctgcttaccgacgtccagttcccctccgatgcccgtgtcgaa
acctgggttgaaaccggcaccgacattccgccctattacgacccgctcgtcgccaagatc
atcactcatggcgcagaccgcgccgaagccctccagcgcatgcgggcggccttgtcatca
accagcctggcgggcatcgagaccaacgtcgactacctgcgggccatctgcgcggagccc
cgctttcaggccggcggcttccccacgaaattcctgggcgagttccactacgccccccgc
ctgacggaagtcatcgatggcggcacgcagaccagtgtccaggactacccaggccgcctc
ggctattgggccatcggcgtcccgccctccggccccatggactggaagtcgtttacagaa
gcgaatgaactcgtgggcaacaaagcctcggcggcagcgttggagtgcaccctcataggc
cccacgctgaagttccacagcagcgccgtcatcgcactcaccggcgcggacatggaggcc
acgctcgacggcgcgcccgtgccgcgctggcagcccgtggaagtgcgcgccggatcaata
ctcgaaatgggcgccgtcagcggacccggagcgcgcgcctacctcgccatgcgcggcggc
attgacgtccgcgagtatctcggcagccgcagcaccttcatccttggccgcttcggtggc
cctgccggtcgtgtcctccgcacgggcgatcttctccactacggcacggccgtcgccgct
gagccgcagccggccaggcccgttccccagttcgatcaccactggaagatcggtgtcacc
tacggcccgcacggagcgcccgacttcttcaccgatcgcgacatcgaccgcttcttcgaa
accgattggaaggtccactacaactccgaccgcactggcgtccgcctcatcggccccaag
cccgaatgggcccgccccgacggcggcgaagcgggtctgcacccgtccaacatccacgac
aacgcctacgccgtgggcaccgtcgacttcaccggcgacatgcccatcatcctgggaccc
gacggccccagttgcggcgggttcgtttgcccggccaccatcgtccacgacgaattgtgg
aagatcggccagctcaaggccggggacacggtccacttccagcgcgtcaacgcggagccc
gccatcctgcaacaagcccccggagtggtggtccgagccgatggcgatcgcaacctcctc
gtcgaattcggcgaagcccatctcgacttcggtctccgcctgaaagcacaggccatggcc
gattggatccgccaacagagcctcaacggagtagtcgatctcacccccggcatccgctcg
ctgcagatccactacgacacagcccgcatccgccgcgaggagatcctcgaagcggtcagc
gcttcggctgcctcggcccagaacgtggaagaggtgccctcgcgcacggtctatctgcct
ctctcctgggacgatccagccactcgcctggccatcgagaagtacatgcgctccgtccgg
cccgacgccccctggtgcccctggaacatcgagttcatccgccgtatcaatggcctcggc
tccgtcgacgacgtgcaccgcatcgtcttcgacgccagctacctgacgctcgccctgggc
gacgtctatctcggcgcccccgtcgcgacacccatcgatccgcgccaccgcctggtgacc
accaagtacaatccggcgcgcacctggacgccggagaacgccgtcggcatcggcggcgcc
tacctctgcgtctacggcatggaaggccccggcggctatcagttcgtcggccgcaccatc
cagatgtggaacacctggcgcaccactgattccttcacccagggcaagccatggctgttg
gacttcttcgaccagatccgcttctaccccgtcagcgccaaggaactcctggagatgcgc
gaaggcttcccgcacggcgaatacaccgtgcgcaccgagcccggcgtcttcaacctcgcg
cagtaccagtccttcatgcagtccattgccggagaagccgcagccttcaaggcgacgcag
caggaagccttccacgcggagcgcgaacgctgggccgccgccggcctggcggaacacatc
gaagaacctgtgcccgtcgcgccgcccgaagagagcgtgccggaaggctgccgctccatc
cgctcccccatcacggccagcgtctggaagatccaggcggaacctggacagaaactcaaa
gcaggcgacccgctcgtcgtactggaagcaatgaaaatggaagtggctgtacccgccccc
gcagcctgcgaggtcgtcgaaatccgctgcgcaccaggagccatcgtccacccgggccag
gccctcatggtggtgcgatga
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