Paludibaculum fermentans: IRI77_27965
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Entry
IRI77_27965 CDS
T06895
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00550
Peptidoglycan biosynthesis
pfer01100
Metabolic pathways
pfer01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IRI77_27965
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IRI77_27965
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfer01011
]
IRI77_27965
Enzymes [BR:
pfer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IRI77_27965
Peptidoglycan biosynthesis and degradation proteins [BR:
pfer01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IRI77_27965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QOY86598
UniProt:
A0A7S7NMZ1
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All DBs
Position
7075036..7076286
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AA seq
416 aa
AA seq
DB search
MKQNFLIPLCIISTLILSAAVPAFAVTATTQKSPTASTKRSKSRRAGATTVSRSTIVKRS
PAAKSFAGTATIKPATARSTVAPRRVRKYYSPWDTPTFADSTYGDVVDGEDLAIRRAAVQ
ALGPYNGSVVVVDPTTGRVMTMVNQKLALTGAYQPCSTIKLVAGLAGLSEGIIERETRLR
LSRRESINLTTALAKSNNAYFANVGEKLGFEKINYYGRLFGLGEKAGINIEGESAGIFPE
EKPKGVPNGMMTSFGEAIGLTPLQLAAIVSSIANGGTLYYLQYPRTLAEVSSLVPQVKRQ
LDIAQQIPEMRPGMMGAVEFGTARRANYDTNEPIFGKTGTCTDSRTHLGWFGSFNEVGKS
KLVVVVLLTGGKSVNGPVAAGIAGQVYKNLSEAQFFTTQQPHATAPTAMIHSGDVH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaacttccttatcccgctttgcattatttccacactgatcctctctgctgct
gtaccggcgtttgcagttaccgccaccacacagaagagcccaaccgcttccaccaaacga
tcgaaatcgaggcgcgcaggcgcaactaccgtttcgcgatcgacgatcgtcaagcgtagc
cccgccgcaaaatcgttcgccggcacggccacgatcaaaccggcaaccgcccggagtaca
gtcgctccgcgccgtgtcaggaagtattacagtccctgggacaccccgaccttcgccgac
tccacttacggtgacgtagtggatggtgaggatctggcgatccgccgcgccgccgtgcag
gcccttgggccgtataacggaagtgttgtggtggtagatcccacgacgggccgcgtgatg
acgatggtcaaccagaaactggctttgaccggcgcctaccagccctgctccaccatcaag
ctggtggccggcctggccggactgagcgaaggcatcatcgagcgcgaaacccgcctgcgg
ctgtcgcgccgcgagtcgatcaacctgacgaccgccctggccaagtctaacaacgcctac
tttgccaacgtgggtgagaaactcggcttcgagaagatcaactactacggccgtctgttc
ggcttgggcgagaaggccggcatcaatatcgaaggcgagagcgccgggatcttcccggaa
gagaagccgaagggcgttccgaacggcatgatgacgagcttcggcgaggcgatcggcctg
acgccgctgcagctagcggccatcgtttcgtccatcgccaacggcggaaccctttattat
ctgcagtatccgcgcacgctggcggaagtgagcagcctggttccgcaggttaagcggcag
ctcgatatcgcccagcagattcctgagatgcgccccggcatgatgggtgccgtggagttt
ggcacggcccgccgcgccaactacgacacgaatgagccgatcttcggcaagaccggaacc
tgcaccgactcgcgtacgcacctgggctggttcggcagcttcaacgaagtgggcaagagc
aagctcgtggtggtggtcctgctgaccggcggcaagagcgtcaacggtcccgtggcggcc
ggcatcgcggggcaggtttacaagaacctgtcggaagctcagttctttacgacccagcag
ccgcacgccaccgccccgacagcgatgatccactccggcgacgttcactag
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