KEGG   Pandoraea faecigallinarum: AB870_14360
Entry
AB870_14360       CDS       T03972                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
pfg  Pandoraea faecigallinarum
Pathway
pfg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AB870_14360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfg03400]
    AB870_14360
DNA repair and recombination proteins [BR:pfg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AB870_14360
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AB870_14360
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_23 DnaJ_CXXCXGXG RsgA_GTPase AAA_21 nSTAND3 AAA_22 AAA_25 BCA_ABC_TP_C Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: AKM31047
UniProt: A0A0H3WTH1
LinkDB
Position
complement(622181..625045)
AA seq 954 aa
METIRIRGARTHNLKNVNLDLPRHQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PDHGLPLESQSVSQMVDAVLALPEDTKLMILAPIVVDRKGEHADLFESMQAQGFVRFRIR
SGGGAANEGTARVYDIEALPKLKKTEKHSIDVVIDRVKVRADLKQRLAESFETALRLADG
RAVALEMDTDKEYVFSSKFACPVCSYSLQELEPRLFSFNNPMGACPTCDGLGQMTFFDPK
RVVAFPALSLASGAIKGWDRRNQFYFQMLQSLAAFYDFDVDTPFEELAEDTQKIVLYGSG
EQEIPFTYVNEKGRTSVRSHAFEGIIPNLERRYRETDSVAVREELAKYQNNRACPDCEGS
RLRREARFVKVGEDKQARAIYEIGNLPLREALGYFHELVLHGSKREIADKIVKEIVARLT
FLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDLGNSVIVVEHDEDMILASDYVVDMGLGAGIHGGTVIAQGSPEQIEKSAQSLT
GQYLSGARRIEVPAERRAPGEDYLRIVDATGNNLRHVNLDLPVGLLTCVTGVSGSGKSTL
INDTLYHAVARHLYGSSAEPAPYEQIDGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFAGVPTAKERGYDPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKR
YNRETLEVQYKGRNISEVLDMTVEQAHEFFKPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLTVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAASKASFTGKYLAPLLTRGK
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggaaaccatccgtattcgtggggctcgcacccacaacctcaagaacgtcaatctcgac
ttgccacgccaccagctcgtggtgatcaccggcctgtcgggttccggcaagtcgtcgctc
gctttcgacacgctttacgcggaaggtcaacgccggtacgtcgaaagcctgtcggcgtac
gcccgtcagttcctgcaactgatggaaaagcccgacgtcgatctgatcgaaggcctgtcg
ccggcgatctccatcgagcaaaaggcgacgtcgcacaacccgcgctccaccgtcggcaca
gtcactgaaattcacgattacctgcggctgctctacgcacgcgtgggcaccccctactgc
cccgatcacggcctgccgctcgaatcgcaaagcgtctcgcaaatggtcgacgccgtgctc
gcgttgcccgaagacaccaagctcatgatccttgcgccgatcgtcgtcgaccgcaagggc
gagcatgcggacctcttcgagtcgatgcaggcgcagggcttcgtacgctttcgcatccgc
tcggggggcggcgccgccaacgaaggcacggcgcgcgtgtacgacatcgaggccctgccc
aagctcaagaagacggagaagcactccattgacgtggtcatcgatcgcgtgaaggtgcgc
gccgatctcaagcaacgtctggccgaatcgttcgagacagcgctgcggctggccgacggc
cgcgccgtcgcgctcgaaatggacaccgacaaggaatacgtgttcagctcgaaattcgct
tgcccggtgtgctcgtattcgttacaagaactcgaaccccgcctgttctcgttcaacaac
ccgatgggggcgtgcccgacgtgcgacgggctgggtcagatgacgttcttcgatccgaag
cgcgtggtcgcgtttccggcgctctcgcttgcgtccggcgcgatcaagggctgggaccgg
cgcaatcagttttacttccagatgctgcaaagccttgcggcgttctacgacttcgacgtc
gataccccgttcgaagaactcgccgaagacacccagaagatcgtgctgtacggctcgggc
gagcaggagattccgttcacgtacgtcaacgagaaaggccgcacgtcggtgcgctcgcac
gcgttcgaaggcatcatcccgaatctggagcggcgctatcgcgaaaccgattcggtcgcg
gtgcgcgaggaactcgccaagtatcagaacaatcgggcgtgccccgattgcgagggcagc
cgtctgcgccgcgaagcgcgtttcgtcaaggtgggcgaggacaagcaggcccgtgccatc
tacgagatcggaaacctgcccctgcgcgaggcacttggctatttccacgaactggtgctg
cacggatcgaagcgcgagatcgccgacaagatcgtgaaggaaatcgtggcgcgcctgacg
ttcctgaataacgtcggcctcgactacctctcgctggagcgcagcgccgacaccctctcg
ggcggcgaagcgcagcgcatccgtctggcgtcgcagatcggctcgggtctcacgggggtg
atgtacgtgctcgacgagccgtccatcggtctgcaccagcgcgataacgatcgcctgatc
ggcacgctcaagcatctgcgcgacctcggcaactccgtgatcgtggtcgagcatgacgaa
gacatgattctcgcgagcgactacgtcgtcgacatggggcttggcgcgggcattcacggc
gggacggtgattgcacagggcagtccggaacagatcgagaagtcggcgcaatcgttgacc
ggccaatacctctcgggcgcgcgccgcatcgaagtccctgccgagcgtcgtgcgccgggc
gaggactatctgcgcatcgtcgatgccacgggcaacaacctcaggcacgtcaatctggac
ctgccggtcggtctgctcacgtgcgtgacgggcgtctccggctcgggcaagtcgaccctc
atcaacgatacgctgtatcacgccgtggcgcgccatctgtacggctcgtcggccgaaccg
gcaccgtacgaacagatcgacgggctggagcacttcgacaaggtcatcaacgtcgaccag
tcgcctatcggtcgcacgccgcgctcgaatcccgccacctatacgggactgttcaccccg
attcgcgaactgttcgcgggcgtgccgacagccaaggaacgtggttacgatccgggccgt
ttctcgttcaacgtgaagggcggacgctgcgaagcctgtcagggcgatggcgtcatcaag
gtcgagatgcacttccttccggacgtgtatgtgccgtgcgacgtttgccacggcaagcgt
tacaaccgcgagacgctggaagtccaatacaagggacgcaacatctcggaagtgctcgac
atgacggtcgagcaggcgcatgagttcttcaagcccgtgccggtcgtggcgcgcaagctc
aagacactgctcgatgtcggcctcggttatatccgtctcggccagtcggccaccaccctc
tcgggcggcgaggcacagcgcgtgaagttgtcgctggaactgtccaagcgcgataccggc
agaacgttgtatatccttgacgaaccgaccaccggcctgcatttccacgacattgaattg
ctgctcacggtgattcaccggttgcgcgatcagggcaacaccgtggttatcatcgaacac
aatctcgacgtgatcaaaacggcggattgggtgatcgatctcgggccggaaggcggtgcg
ggcggcgggcagatcattgcacagggcacgcccgagcaggtcgccgcgagcaaggccagc
ttcaccggcaagtatctcgcgccgctgctcacgcgcgggaagtaa

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