Pseudocercospora fijiensis: MYCFIDRAFT_193055
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Entry
MYCFIDRAFT_193055 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYCFIDRAFT_193055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfj03400
]
MYCFIDRAFT_193055
DNA repair and recombination proteins [BR:
pfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
MYCFIDRAFT_193055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-GeneID:
19335311
NCBI-ProteinID:
XP_007921835
JGI:
193055
UniProt:
N1Q875
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MAPGRGKGKAAVRSTASAARAPATRSKRPGASTYTDDDVADVYTSMVAEAEAAEAASEHR
PLKRRRVAPNPRLERPADVEVQSADVVTPSSPVSATPLAPVTQEPARLQTVQDSSESEGS
DLEFEDVDVDRVGNVSDGSVDGIEDLSIAVEPESSTRKSALPRRKPGTAVEKAHRLLVHK
LHLLCLLGHCMYVNGRCNNAAAQRHVRSVLSSKTVSYLNPKQNDTQFQRNRSFMDGLEQA
VNNFNAEYRVTGSGLMKPHWNIDGDMPEVRETGLTPTDSSDFVLAAKDLEGSQDLGNQLF
CTLLRSVGVDARIVCSLQPLPFSSAPKSSTPSKARSTPNRVFSAQTSSPIKISSNDDKSI
SNSKTIGKVPSVRRRLGQPDFAAESSKPQVVKKKTKSAPKLQYPVFWVEAFNEAQQKWIA
VDAVVTNTVNKASKLEPPASYDLGQLSYVIACEDDGTARDVTRRYAKAFNAKTRRHRVEA
SQNGAKWWKAVMRFFRRRGGKLDREQVEDAELAQKEAREGMPSNVLDFKDHPYYALERHL
KRHETIHPRREMGKVNAGTAAKPRLEPVFRRQDVQVCKSADKWYRVGREIKEGEQPLKHV
AARTRRHVLVDDEDEEAATTPLYAPFQTQLYMPPPVQRGRVPRNVYGNLDIYVPSMVPPG
GTHIRHLLAQRAARLLKVDSADAVTGFKFQGRHGTAVIDGVVVAEQYADAVWAVINGIED
EMEEEASRARSLMALKMWKRFLTGLRVAERVSSYADPSAESSEQMADEGNEFMDDAHGLL
LGQADDAPLITAGQFTLTELNMGSKPTRKPKRKHDSDTDMETLEEDEWRLL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggcagaggtaaaggcaaggctgccgtcaggtcgacggcgagcgctgcgaga
gctcctgcgacacggtcaaagcggccaggcgcatcaacatatactgacgatgacgttgct
gatgtctacacatccatggtagcagaggcagaagctgcagaagctgcatccgaacatcga
ccgctaaagaggagacgagtcgctccaaatccgagattagagaggccggcagatgttgag
gtccagtcagcagatgtggtcactccttcttcgcctgtctctgcaacacccttggcaccc
gttacacaagaaccggcaaggctacagactgtgcaggactcttcagagtcggaaggaagc
gatctagagtttgaagatgttgatgtcgatcgcgttggcaacgtttccgacggatcagtg
gacggcatagaagatttgtctattgctgtcgagcccgagagcagcactagaaagagtgcc
ctgcccaggcgcaaacccggaacggccgttgagaaggcgcatcgactgcttgtacacaag
cttcatcttctatgcctacttggtcactgcatgtacgttaatggaagatgcaacaatgct
gcagctcaacgccacgttcgctctgtactaagctcgaagactgtgtcatatttgaatcca
aaacagaatgatacacaattccagcggaatcggtctttcatggacgggcttgaacaggcg
gtgaataatttcaatgccgaataccgagtgactggttcaggactgatgaagcctcattgg
aatatcgatggagacatgcctgaggttcgcgagacaggacttacacctactgatagctcc
gacttcgtcttagcggccaaggatcttgaagggtcgcaggatcttggtaatcaactcttt
tgcacgttgcttcgctcagttggcgtcgacgctcgcatagtttgttcattacaaccgctg
ccgttcagcagtgctccgaagtccagcacacccagcaaagcgaggagcacaccgaacaga
gtcttttccgcacagacgtcctctcccatcaagatcagcagcaacgacgacaaatctatc
agcaattccaagactataggcaaagtcccttcagtgcgaagacgtcttggtcagccggac
tttgctgctgaatcaagcaagccgcaggttgtgaagaagaagactaaatctgcccctaaa
ctgcagtatcctgttttctgggtagaggctttcaacgaggcgcagcagaaatggattgct
gtcgacgcagtagtgacgaacacggtcaacaaggcctcgaaattggagcctccagcttcg
tacgatcttgggcaattgagttatgttatagcttgcgaagacgatggcactgctcgtgac
gtgaccagacgctacgccaaagccttcaacgcgaagactcgccgacatcgggtagaagca
tcacagaatggcgcaaagtggtggaaggcagtcatgcgattcttccgacgacgcggtggg
aagcttgatcgtgaacaggtcgaggatgctgagctggcacagaaagaagcgagagagggg
atgcccagcaacgttctcgacttcaaagatcatccatattatgcactagaacgccatctc
aaacgacacgagacaatccatcccagacgcgaaatgggaaaagtgaacgctggaacagct
gccaaacctcgactggagcccgtatttcgtagacaagatgtccaggtgtgcaaaagcgcg
gacaagtggtatcgtgtgggtcgcgagatcaaggagggtgagcaaccactgaagcatgtt
gctgcacgcacgaggcggcatgtgttagtcgatgacgaggacgaagaagcagcgacgact
cctctatatgctcccttccagactcagctttacatgccgcccccagtacagcgcggtcgc
gtaccgagaaatgtctatggcaatttagacatatatgtgccttcaatggtaccgccaggt
ggcacgcacattagacatctgcttgctcagagagctgcacggcttctgaaagtcgattct
gcggatgcggtaactggtttcaaattccaaggtcggcatggcacagcagttatcgatggt
gtcgttgtcgcggaacaatatgctgatgcggtctgggcggttatcaatggtatcgaagat
gagatggaggaagaagcatctagggcaagaagtttgatggctttgaaaatgtggaagcga
tttttgactggcctgcgtgtcgcggaaagagttagttcgtatgcagatccttctgcagaa
tcttccgagcagatggcagacgaaggcaacgagttcatggatgatgcgcatggactcttg
cttgggcaagctgatgacgccccactcattacggcaggtcaattcacgttgacagagctg
aatatgggatccaagcctacacggaagcccaagcgaaagcacgatagtgatacagatatg
gaaacgctggaagaggatgagtggaggcttctttga
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