Pseudocercospora fijiensis: MYCFIDRAFT_43692
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Entry
MYCFIDRAFT_43692 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K10610
DNA damage-binding protein 1
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03420
Nucleotide excision repair
pfj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MYCFIDRAFT_43692
09124 Replication and repair
03420 Nucleotide excision repair
MYCFIDRAFT_43692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfj04121
]
MYCFIDRAFT_43692
03400 DNA repair and recombination proteins [BR:
pfj03400
]
MYCFIDRAFT_43692
Ubiquitin system [BR:
pfj04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
MYCFIDRAFT_43692
DNA repair and recombination proteins [BR:
pfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
MYCFIDRAFT_43692
TCR (transcription coupled repair) factors
Cul4-CSA complex
MYCFIDRAFT_43692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
19339555
NCBI-ProteinID:
XP_007930558
JGI:
43692
UniProt:
M2ZIK2
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MAYLAPIHRPSSIRHALKLSFTSPDAEDLVVAKANRLEIWRASPGDTTLVLQHSKAIYGK
VTLLHKLRPATSQTDHLFVGTDRYNYFTLSWDGERQDLKTEKSMVDIADKAARDSQTGDR
VHIDPTSRFMTLEVYEGVVNVLPIAHAGKGKRKAADNEIGELGDPIQVRIPELFVRSSCF
LYRRDTGPRGKTDPMFAVLYEDSKNQVRIKIRELEYSPSLRPNEEPATAELEKGVDVTGS
LEMGSSFMIPLPAPTYGLLVVGETRITYVDEWEHKVQDSQPLEDATVFVAWCKLDEQRYI
LADDYKKLYLLMVNTSPHGDYQSLEIDVLGETSRASTLVYLDEGRVFVGSHQGDSQVIQI
SPKRIDVLQSFPNIAPILDFTVMDMGNRSLDAPVNEFSSGQARIVTGSGAFNDGSLRSVR
SGVGLEDRGSLGDLGAPISSIFSLRTSAAAQYVDTLIVSHVSHTNVVVFTEDGDIEARDS
FRGFELKDATLFAGDLRDGRAVQVTSSSVLLTDSEGDMVTDRWQAPSGTSITAVAADGEK
ILVSLQGAVLVVLDLSASNIQVQAERKFGSEEQVSCIALSPSIPNACVAGFWKDSKVSFL
SLQDLQPTASERVAEEESLAVPRSLIVANILKDQPATLFVGLADGNVVTYSVTSAQQPFS
ARKCIILGTQQANFAALPRADGLQNVFATCEHPSLIYGSDGRLVYSAVTAENATCIASFD
SFGDYAGAIAIATTDENGENELKLAVVDEERTTHVQDLFIHETVRRIAYSAELKAFGLGC
IKRTLSAGNEEVASHFKLVDEVAFKELDTWALNEDELVECVIRCYLDDGSGEEAERFVVG
TAYLDDQDANNAKGRILVLEITEDRRIKLVTELAVRGACRCLAVCQGRIVAALVKTIVVY
DFEYQTPSTPALTKKASYRTATAPIDICVTNNTIAVTDLMKSLSLLEFKAGRQGQPDTLI
EIARHFETLWGTACARVSENTYLESDAEGNLIVLQHDINGFSQEDRRRLRVTSEFLLGEM
VNRIRPITVQPSPGAVVTPQAFLATTDGSIYVYCEIGKPRQDLLMRMQTLMADMVKSPGG
VRFAKFRGFKTLVRDMGEEGPVRFVDGELIERFLDMPEVLQNEVVKGLDGTGVDLEGLRG
MVEGLRRIH
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatctcgcaccaatccacaggccctcgagcattaggcatgctctgaagctatca
tttacatcgcctgatgcagaagacttggttgtggcaaaagcaaacaggctggagatatgg
agggcaagtcctggcgataccaccttagtcctccagcattcgaaggcgatatacggcaag
gtgactttgctgcacaagctccgacccgccacgagccagacagatcatctgttcgtcggc
acagatcggtacaactacttcaccctcagctgggatggcgaacggcaagacctcaagacc
gagaagagcatggtcgacattgccgacaaggcagcaagagacagccagacaggcgataga
gtgcatattgaccccacgagtcgattcatgactttggaggtctatgaaggcgtcgtaaat
gtcctgcctatcgcacatgctggtaagggcaagcgaaaagccgccgataatgagattgga
gaattgggagacccaatccaagtcaggataccagagctgtttgtgagaagtagctgtttt
ctctatcgacgagatactggacctcgaggaaagacagaccccatgtttgcagttctatac
gaggacagcaagaatcaggtccgaataaagatcagagagctggagtactcacccagtctg
aggccgaacgaggagccagctactgccgaactagagaagggcgtcgatgtcaccggctca
ttagaaatgggctcaagtttcatgatcccgctccctgcacccacatacggtctcctagtc
gtgggcgaaaccaggataacatatgttgatgagtgggagcataaggtgcaggactctcaa
ccgctcgaagatgcaacagtgtttgtggcctggtgcaaactggacgagcaacgatatata
ctagcagacgactacaagaagctctacttactcatggtcaatacctcaccacatggagac
tatcaaagcttggagatcgacgtgcttggcgaaactagtcgagcaagcacactggtctac
ttggacgaaggtcgagtattcgtcggaagccatcagggagacagccaagtcattcaaatt
tcacccaagcggatagacgtgctgcaaagctttcctaacatcgcaccaatcttagacttc
acggtcatggatatgggcaatcgaagccttgacgcacccgttaatgagttctcgagtgga
caagcaaggatagtcactggttctggagccttcaatgatggaagcttgcggtctgtgaga
tccggtgtcggtctcgaggatagaggaagccttggtgaccttggtgcaccaatatcatcc
atcttcagcttgcgtaccagtgctgcagcccaatatgtcgacaccctcattgtcagtcat
gtctcgcacaccaatgtggtggtgtttacagaagacggagatattgaagcaagagactca
ttccgcggctttgagctcaaagatgccacattgttcgcaggggatctacgtgacggacgc
gcagtacaagtgactagctcgtcggtgctacttactgattccgaaggcgacatggtcact
gaccgctggcaagcgccaagcgggacgtctatcacagcggtggcggctgatggcgagaag
attctcgtctcgcttcaaggagcagtattagtagtcctggatctctcggcttccaacatc
caagtgcaagccgagcggaagttcggaagcgaagagcaagtctcgtgcatagcgctttca
ccatcaatacccaacgcgtgcgtagccggcttctggaaagacagcaaagtctcattcctt
tccttgcaggacttgcagccaactgccagcgagcgagtggcagaggaagagtctttggca
gtgccaaggtcgctgattgtggcaaacatattgaaggaccagccagcaacgctctttgta
ggtctcgcagacggtaatgtggtcacttacagcgtcacatcagcgcagcaaccattctcg
gcacggaaatgcatcatacttggcacacaacaagccaacttcgcagctttaccacgagcc
gacgggttacagaacgtctttgctacgtgtgagcatccttcactgatttacggttcggat
ggacgactcgtctactctgctgtcacagcagagaatgcaacatgtatagcatcctttgac
agcttcggcgactatgcaggtgctatcgccatcgccacaactgatgagaacggcgagaat
gagctcaagctcgccgtcgttgatgaggagagaacaacccacgtgcaagatctgttcatt
catgagacggtacgacgaattgcatattcggcggagctgaaggcgttcggccttggctgc
atcaagcgtaccctttccgcaggcaatgaagaggtcgcatcgcacttcaagctcgtcgac
gaggttgccttcaaagagcttgatacatgggcactgaatgaagatgaactcgtcgaatgc
gtaatcaggtgttacctcgatgatggctcaggcgaggaggctgagcgattcgtcgttggt
accgcatatttggacgaccaggacgcaaataatgccaagggacgaatactggtactcgag
atcacggaagaccggcgcatcaagctagtcactgagctcgcagtacgtggtgcctgccgc
tgccttgcagtctgccaaggcagaatcgtcgctgctctcgtgaagacgatcgtggtatac
gacttcgaatatcagacaccgtctacacctgctctcaccaagaaagcttcctaccgaaca
gccacagcaccaattgacatctgcgtcaccaacaacacaatcgcagtcaccgacctcatg
aaatctctctccctactcgaattcaaagctggccgtcaaggccaacccgacaccctcatc
gaaattgcccgtcacttcgaaacactctggggcacagcctgcgcccgcgtcagtgagaac
acctacctcgaatctgacgctgaaggcaatctcattgtcctccaacacgacatcaacggc
ttctcccaagaagaccgccgccgtctccgcgtcacctcagaattcctcctcggggaaatg
gtcaaccgcatccgtcccatcaccgtccagccctctcccggcgccgtcgtcaccccacaa
gctttcctcgccaccaccgatggcagcatctacgtctactgcgaaatcggaaaacctcgg
caggatcttttgatgcggatgcagactttgatggctgatatggtcaagagtcctggtggt
gtgaggtttgcgaagttcagagggttcaagacgctggtcagggatatgggtgaggaaggt
ccggtgcgatttgtggatggggagttgattgagaggtttttggatatgcctgaggtcttg
cagaatgaggttgtcaagggtttggatgggacgggggtggatttggagggtttgaggggg
atggtggaggggttgaggaggatacattag
DBGET
integrated database retrieval system
