Pseudocercospora fijiensis: MYCFIDRAFT_56999
Help
Entry
MYCFIDRAFT_56999 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCFIDRAFT_56999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_56999
Spliceosome [BR:
pfj03041
]
Complex C
Other components
Step II factors
MYCFIDRAFT_56999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
DUF5711
NBCH_WD40
Nup160
Motif
Other DBs
NCBI-GeneID:
19340336
NCBI-ProteinID:
XP_007920201
JGI:
56999
UniProt:
N1Q9Y7
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MSLVPARNGANGPPTRANQLVSDKPFQTSTKGKVPTGYAQEIAISEQSFRDLHREVEKSG
AAGKKRKRETKGDSSVVYGAGAYKGPWAKYEEQRIDSDSGEEIEVEVSGDESGEEVVEYE
EDAIVANPTKGTIAGTEYGQVGQDTESSVFEGSQQYDYQGRTYMHVPQDLDIDLVGDFEN
LNLKCFHPKKLIHTYKSHGKNAHEKALTGLKFFPSSGHLLLSSAADGKVRLWDVYHDREL
LRSYTGHTKSVVDVDFTPDGTKFVSASYDRQMKVWDTETGKCLGRYSTGSTPHVVRWQPE
DPSGHEFLAGMHDNKIVQMDTRLPADGEKKNPVQEYDHHLGPVNTITFTDENRRFITTSD
DKSLRAWEYNIPVPIKFIAEPYMFPMVKSATHPAKGAVLLQSSDNTIKVYNTGEKIRQNR
KKDFRGHNNAGYAIDIDVSPDGGIVSSGDSGGFVCFWDWKSCKMWHKIKASDSAVIATAW
HPREASKVVTGDLNGVIKYWD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgtaccagcgcgcaacggcgccaatggaccgccaactcgagcgaatcaactt
gtcagcgataagccttttcagacttcgacgaaaggaaaagtgccaacaggttatgcgcaa
gagatcgccatatcagaacagagcttccgcgatctgcaccgcgaggtcgaaaaatcaggt
gctgcgggcaagaagcgcaagcgggagacgaaaggcgacagcagcgtggtgtacggcgct
ggggcttacaagggtccttgggcgaagtacgaagaacagcgcatagacagcgacagcggc
gaagagattgaagtcgaagtatccggcgatgagagcggcgaggaggttgtcgagtacgaa
gaagatgcgattgttgcaaatcccacgaagggcactatcgcaggcacagaatacggccaa
gtcggacaagacacagaaagcagtgtattcgagggatcgcaacagtacgattaccagggc
cgaacatatatgcatgtgccgcaggacctggacatcgatttggttggcgatttcgagaat
ctcaacttgaaatgctttcaccctaagaaactgatacacacctacaagagccacggaaag
aacgctcacgagaaagccttgactggcctcaagttcttcccgtcgtctggccacctcctc
ttatcgtccgcagccgatggcaaggtcaggctttgggatgtctatcatgaccgcgagctg
ctccggtcctacactgggcacaccaagtctgtggtggacgtggacttcactccagatggc
accaaattcgtctccgcttcgtacgatcgtcaaatgaaggtatgggacactgaaactggg
aagtgcctaggccgctacagcaccggctcaacacctcacgttgtccgatggcagcctgag
gatccttctggccatgaattcttggctggtatgcatgacaacaagatcgtgcagatggat
acgcgattgccagccgatggcgagaagaagaaccctgtgcaggagtacgatcaccatctt
ggaccagtaaataccatcaccttcaccgacgagaatcggcgatttattaccacttccgac
gacaaatccctacgtgcgtgggaatacaacatcccggtgccgatcaagttcattgctgag
ccatatatgttcccaatggtcaagtctgctacacatcccgccaagggcgcagtgctgctg
cagtcctctgacaacacgatcaaggtatataacactggcgagaagatcaggcagaatcga
aagaaggacttccgaggccacaacaacgccggttacgccatcgatatcgatgtgtcgcct
gacggaggcattgtgtcttcaggtgacagtggagggttcgtatgcttctgggattggaag
agctgtaaaatgtggcataagattaaagctagcgactctgctgtcattgcgactgcatgg
cacccaagagaggcttcgaaggtggttacgggtgatctgaatggagtcataaaatactgg
gactag
DBGET
integrated database retrieval system