Pseudomonas frederiksbergensis: PFAS1_14380
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Entry
PFAS1_14380 CDS
T04786
Name
(GenBank) preprotein translocase subunit SecY
KO
K03076
preprotein translocase subunit SecY
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02024
Quorum sensing
pfk03060
Protein export
pfk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PFAS1_14380
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PFAS1_14380
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFAS1_14380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfk02044
]
PFAS1_14380
Secretion system [BR:
pfk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PFAS1_14380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-ProteinID:
APV40481
UniProt:
A0A1H4MZI4
LinkDB
All DBs
Position
3104788..3106116
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AA seq
442 aa
AA seq
DB search
MAKQGALSALGKGGMSELWARLRFLFLAIIVYRIGAHIPVPGINPDRLADLFRQNEGTIL
SLFNMFSGGALERMSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKIAQYTR
YGTVVLALVQAIGMSIGLAGQGVAFTGDFGFHFVAVSTFVAGAMFMMWLGEQITERGVGN
GISMLIFAGIVAGLPRAIGQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIA
VHYAKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGTWFGQSEGMGWLQD
ISQSIAPGQPLNILLFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARY
IDGVLTRLTLFGALYMTAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMSQVQSHLV
SHQYESLMKKANLKGYGSGMLR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcaaggtgctctctctgcgctcggcaaaggcggtatgtctgaactctgggct
cgtctgcgttttctattcttggcgattatcgtctaccgaataggcgcacacatcccggtt
ccaggtattaacccggaccgactcgcggacctgtttcgacagaatgaggggaccattctt
agcttgttcaacatgttttccggcggtgcgctggagcggatgagcatctttgcattgggg
atcatgccgtacatctcggcatcgatcatcatgcagctgatgaccgccgtcagcccacag
ctggagcagttgaagaaggaaggtgaagctgggcgtcgcaagatcgctcagtacacccgc
tacggcactgtcgtcctcgctctcgttcaggctattggcatgtccattggtctggcaggg
cagggcgttgcgttcactggtgactttggcttccatttcgtcgcggtatccacgtttgtg
gctggtgcgatgttcatgatgtggctgggtgagcagattactgagcgtggtgttggcaac
ggtatctcgatgttgattttcgcaggtatcgtcgccggtcttccgagagcgatcgggcag
tctttcgagtctgcgcgtcagggtgatatcaacatttttgccctggttgccatcggtttg
ctggcagtagcgattatcggtttcgtggtgttcattgagcgtggtcagcgtcgtattgct
gttcattacgccaagcgtcagcaaggccgtaaggtctttgctgcgcagactagccacttg
ccgttgaaggtgaacatggccggtgttattccggccattttcgcgagcagcattttgctg
ttcccggcttcgttgggtacctggttcggtcagtctgaaggtatgggctggctgcaggac
atctcgcagtcgatcgctcctggtcagccgttgaatattctgctgtttagtgcagggatt
attttcttctgcttcttctatacggcgttgatgttcaatccgaaagacgtagcggaaaac
ctgaagaagtccggtgcctttattccgggcatccgtccaggtgagcagtctgcgcgctac
attgatggcgttctgactcgtttgaccctgttcggtgctctatatatgacggccgtgtgt
ctgttgccccagttcctggtggttgcggcaaacgttccgttctaccttggcgggacctcg
ttgctgatcgtcgtcgtggttgtgatggacttcatgtcccaagtacaatcgcacctcgtt
tcgcaccagtacgaatccctgatgaagaaagccaacctgaagggttacggcagcggcatg
ttgcgctga
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