Pseudomonas frederiksbergensis: PFAS1_24560
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Entry
PFAS1_24560 CDS
T04786
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_24560
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFAS1_24560
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
MarR
Motif
Other DBs
NCBI-ProteinID:
APV42329
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Position
5206082..5206957
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AA seq
291 aa
AA seq
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MTISHTQLKAFHAVAMNGSFTRAAEQLCLSQPAVSDQVRKLEDYYGVMVFYRDKRLVRLT
EVGERLFGLTQRLFDISIDAHDMLTDYRTLSTGTLNLAVDAPVHVLPYVSRFCSRYPGVE
VKIETANTDEVLQRLFSHQADIALLGRNIEDDRLMTLHLRSDPMLAFVAHDHPWAQRDSI
CLADLDNTPMVLREQGSVTRLSLEEEMAGAGLHIRKAIEVEGREAAREAVAIGMGVGVVS
AAELGSDSRVRGLPIVDSQRHFTETLVCLRAQSSRRILTTFFDMVREGLGE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttcccatacccaactcaaggcgtttcacgccgttgcaatgaatggcagcttc
acccgggcggccgagcaactctgcctgtcacaacccgcggtatccgaccaggtgcgcaag
ctcgaggattattacggggtgatggtgttctaccgcgacaagcgcctggtgcgcctgacg
gaagtgggcgagcggttgttcggcctgacccagcgcctgttcgatatcagtatcgatgcc
cacgacatgctgacggactaccgcaccctgtcgacgggaaccctgaaccttgccgtggat
gcgccggtgcacgtcttgccctatgtctcacgcttctgcagccgttaccccggcgttgaa
gtgaagatcgaaaccgccaataccgacgaggtcctgcagcggttgttcagccaccaggcc
gacatcgccctgctggggcgcaacatcgaagacgatcgcctgatgacgctgcacctgcgc
agcgatcccatgctcgccttcgtcgcccatgaccatccctgggcgcaacgggattccatc
tgccttgccgacctggacaacacacccatggtcttgcgcgagcaaggttcggtcacacgg
ttatcgctggaggaggagatggctggggcgggtttgcacattcgcaaggccatcgaagtg
gaagggcgtgaagcggcacgcgaggccgtggcgattggcatgggcgtcggggtcgtctcg
gcagccgagctgggctcggactcccgggttcgcggcttgccgattgttgactctcagcga
cacttcaccgagacattggtctgtctgcgggcacagagttcgcgacgtatcctgacgacc
ttttttgacatggttcgagaagggttgggcgagtga
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