Pseudomonas frederiksbergensis: PFAS1_24900
Help
Entry
PFAS1_24900 CDS
T04786
Name
(GenBank) FAD/NAD(P)-binding oxidoreductase
KO
K22549
D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00470
D-Amino acid metabolism
pfk01100
Metabolic pathways
Module
pfk_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFAS1_24900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
FAD_oxidored
NAD_binding_8
GIDA
FAD_binding_2
HI0933_like
DAO
NAD_binding_9
AlaDh_PNT_C
Thi4
Pyr_redox_3
Lycopene_cycl
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
APV42388
UniProt:
A0A1P8F1R0
LinkDB
All DBs
Position
complement(5288617..5289873)
Genome browser
AA seq
418 aa
AA seq
DB search
MSEYADLLIIGGGPAGMAAALAAAPSGARIVLLDDNPLPGGQIWRDGPQANLPNTARQMR
EQLEACSNIYRHSGTRVISSAGPKQLLVEDADRGWLIGYDKLILCTGARELLLPFPGWTL
PGVTGVGGLQALIKGGLPVQDERIVIAGSGPLLLASAATAKHNGARVLRIAEQASAVAVA
GFAAQLPRWPYKLMQSVTLFDRHYRPGTHVLAALGNERLEAVRLQQQGKIVELECDRLAC
GFGLIPNTQLGQALGCELENQAIAVDAWQNTRRADHYAAGECTGFGGSELALVEGAIAGH
AAVGDLDSARALWPRRTRWQGFANALNKAFTLDPQLKSLAQPDTLVCRCEDVPYAALAGH
TGWREAKLASRCGMGACQGRVCGGALQHLFGWQPSAPRPPFSPARIETLLCLDDTPPA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatacgccgacctgctgatcatcggcggtggtcccgccggcatggccgctgcg
ctcgccgcagcgccaagcggtgcgcgcatcgtcctgctcgatgacaacccgctgccgggc
gggcaaatctggcgtgatggccctcaggccaacctgccgaatacagcgcgtcagatgcgc
gagcaactcgaggcgtgcagcaacatctaccgccactccggcacgcgggtgatttccagc
gccgggccgaaacaactgctggtcgaagacgctgatcgtggctggctgatcggttacgac
aaactgattctgtgtaccggcgcccgcgaattgctgctgcccttccccggctggacgctg
cccggcgtgactggcgtgggtggcctccaggcattgatcaagggcgggctgccggtgcag
gacgaacgcattgtgattgccggcagcggaccgttattgctggccagcgccgccaccgca
aaacacaacggcgcccgggtgctgcgcatcgccgagcaggccagcgcggtcgccgtcgcc
ggtttcgccgcgcagttgccacgctggccatacaagctgatgcaatcggtcacgttgttc
gaccgccattaccgtcccgggacccatgtactggccgccctgggcaatgagcggctggaa
gctgtgcgcctgcaacagcaaggaaaaatcgtcgaactggaatgtgatcgcctggcctgt
ggcttcggcctgatacccaacacccaactcggccaagccctcggctgcgaacttgaaaat
caggcgattgccgtcgatgcctggcagaacactcgccgcgctgatcattacgcggcgggt
gaatgcaccggtttcggtggcagtgaactggcattggtcgaaggcgccatcgctggccac
gccgccgtcggcgaccttgattcggcccgagcattgtggccgcgtcgtacacgttggcag
ggtttcgccaacgccctcaacaaagcattcaccctcgacccgcaactcaagtcgctggca
caacccgacaccttggtgtgccgctgcgaagacgtgccttacgcagcgctcgccgggcac
actggctggcgcgaggccaaactggccagtcgctgcggcatgggcgcttgccagggccgg
gtgtgtggcggcgcgttgcagcacctgttcggctggcaaccttcggcgccacggccaccg
ttcagtccggcgcggatcgagaccttgctgtgcctggacgacaccccaccggcctga
DBGET
integrated database retrieval system