Pseudomonas frederiksbergensis: PFAS1_25645
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Entry
PFAS1_25645 CDS
T04786
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk01501
beta-Lactam resistance
pfk02024
Quorum sensing
Module
pfk_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFAS1_25645
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFAS1_25645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_25645
01504 Antimicrobial resistance genes [BR:
pfk01504
]
PFAS1_25645
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_25645
Antimicrobial resistance genes [BR:
pfk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PFAS1_25645
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PFAS1_25645
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PFAS1_25645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
APV42527
LinkDB
All DBs
Position
5458710..5460191
Genome browser
AA seq
493 aa
AA seq
DB search
MTDRSLITLAAPLVSARGSRLLSLALCVAMLSACAIGPDYQRPPAAAPAQYKEAAGWRQA
NPSDSLARGAWWELYGDQQLNGLIEKLNSANQTVAQSEAQYRQAQALVRSARGAFFPTVD
LTVGKNRSSQGTGSSSSSLTSSSSGIRDTYTAQAGVSWEADVWGKLRRGLEADTANAEAS
YADLAAMRLSQQSELVQNYLQLRVIDQQKRLLEATVEAYQRSLTMTENQYRAGVSGKDAV
AQAQTQLKSTQADMVDLIWQRAQFENAIAVLIGLPPAEFNLAETKDIPALPQIPLSLPSQ
LLERRPDIASAERSVMAANANIGVAKAAYYPDLTLSLNGGYSSSTTSNWISVPNRFWSVG
PQLAMTLFDGGQRSAEVDRSEAAYDETVAKYRQTVLDGFREVENYLVQLKVLEDEAGVRQ
EALDAARESLRLTQNQYKAGVIAYLGVVVVQATALNNERSVLSLLQSRLIASVQLIAALG
GGWDGALQVSEKE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgttcgcttatcactctggctgcaccgctggtatcggcccgaggctcgcgt
ttgttgagcctggcgctgtgcgtggcgatgctcagcgcctgcgccatcggcccggattac
cagcgcccgccagcggctgcgccggcgcaatacaaggaagcggcaggctggcgtcaggcc
aatcccagcgattccctggcccgtggcgcctggtgggagttgtatggcgatcagcagctc
aatggcctgatcgaaaaactcaacagtgccaaccagaccgttgcgcagtccgaggcccag
taccgtcaggcccaggccttggtgcgcagtgcccgtggcgcgtttttcccgaccgtggac
ctgaccgtcgggaaaaatcgctccagccagggcaccggcagcagcagttcgagcctgacc
agttcttccagcggtattcgcgacacttacaccgcacaggccggggtcagttgggaggcc
gacgtttggggcaagctgcgccgaggcctggaagccgataccgccaacgccgaggcgagt
tatgccgatctggcggcgatgcgcttgagccagcagtcggaactggtgcagaactatctg
caactgcgcgtgatcgaccagcagaaacgcctgctggaagcgacggtcgaggcctatcag
cgctcgctgacaatgactgaaaaccagtaccgcgccggtgtctccggcaaggatgcggtg
gcgcaggcccagactcaactcaagagcacccaggctgacatggttgatttgatctggcag
cgggctcaattcgagaatgccattgccgtcctgatcgggttaccgccggccgagttcaac
ctggctgaaaccaaagacattcctgcgttgccccagataccgctgagcctgccttcgcaa
ttgctcgagcgccgcccggacatcgcctccgccgaacgttcggtgatggcggccaatgcc
aacatcggcgtggccaaggcggcttattacccggacctgacgctgagtctgaacggcggt
tacagcagtagcaccacttccaactggatcagcgtgccgaaccgcttctggtcggtcgga
ccgcaattggccatgaccttgtttgacggcggccagcgctccgccgaagttgaccgcagc
gaagcggcctacgacgagaccgtggccaagtaccgtcagacggtgctcgacggcttccgt
gaagtggaaaactacctggtgcagctcaaggtcctggaagacgaagcgggcgtgcgccag
gaagcactggacgcagcgcgtgaatccttgcgcctgactcagaaccagtacaaggccggt
gtgatcgcttacctgggtgtggtggtggttcaagccacagcgttgaacaatgaacgcagc
gtgctgagcctgttgcagagccggttgattgccagcgtgcaattgatcgcggcattgggc
ggtggttgggatggggcgttgcaggtgagcgaaaaagagtag
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