KEGG   Pseudomonas frederiksbergensis: PFAS1_28250
Entry
PFAS1_28250       CDS       T04786                                 
Name
(GenBank) ornithine decarboxylase SpeF
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk00330  Arginine and proline metabolism
pfk00480  Glutathione metabolism
pfk01100  Metabolic pathways
pfk01110  Biosynthesis of secondary metabolites
pfk04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    PFAS1_28250
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    PFAS1_28250
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    PFAS1_28250
Enzymes [BR:pfk01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     PFAS1_28250
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase
Other DBs
NCBI-ProteinID: APV43008
UniProt: A0A1P8F3J8
LinkDB
Position
6058491..6060686
AA seq 731 aa
MKAALKIAASDSAFECFQTSREVIPLNQTDYTDIAVAVFSVEDVMAGALDTLQRTGFDIP
IFLVASPGSGNRARDVYQHLQDVLLQVNGIFDPSRNNAEYHGNQLETAAKAYEDSLLPPF
FDALKHYTESANATFACPGHQGGQFFRKHPAGRQFFDFFGETLFRADMCNADVKLGDLLI
HEGPALLAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHQGA
LIQAGATPVYLETARNPYGFIGGIDAHCFEEGYLRELISEVAPDKARLPRPFRLAIIQLG
TYDGTVYNARQVVDRIGKLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLHENDPGIFVTQ
SVHKQQAGFSQASQIHKKDRHIKGQARYCSHAQLNNAFMAQASTSPFYPLFASLDVNARI
HSGRSGLRLWEDCVKFGIDARKLILEACTMVRPFVPDTIDGRPWQDHPTEDIANDIRFFE
FHPKDRWHAFSGYADKQYFIDPCKLLFTTPGIDPVDGSYTDFGIHAGILANFLRENGIVP
EKCDLNSILFLLTPAEDWAKMTHLASQIARFERFISDDAPMSRVLPAIYAQHQERYRNYT
IRQLCQEMHDLYRTHDVQHLQKAMFRKEHFPKKAMNPQAAQFEFIRGNVELVALADAQGR
IAAEGALPYPPGVLCVVPGEIWGGAVLKYFLALEEGINSLPGFTPELQGVYLKQEGDRIR
AYGYVIKTLPH
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgaaagcagccctgaaaattgccgccagtgattccgcgttcgagtgtttccagacctcc
cgagaagtcattccactcaatcaaaccgactacaccgatatcgcggttgcggtgttctct
gtcgaggatgtgatggcgggcgccctggacaccttgcagcgaaccggtttcgatatcccc
attttcctcgttgcctcccccggttccggcaaccgcgcccgggacgtctaccagcacctg
caagatgttctgcttcaggtaaatggcatttttgacccctcgcgcaacaacgctgaatac
catggcaaccaattggagaccgcggcaaaagcctatgaagacagtctgctgccgccgttc
ttcgacgcgctcaagcactacaccgagtcagccaacgcgaccttcgcctgcccgggtcac
cagggcggccagttctttcgcaaacacccggcgggccggcagttcttcgacttcttcggc
gaaaccctgtttcgcgccgacatgtgcaacgccgacgtcaaactcggcgatttgctgatc
cacgaaggcccggcgcttctggcgcaaaaacacgccgcgaaagtgttcaacgccgacaag
acctacttcgtgctcaacggcacctcggcgtcgaacaaggtggtgaccaacgcattgctc
acgcctggcgatctggtgctgttcgaccgcaacaaccacaaatccaatcaccagggtgca
ttgatccaggctggggctacccctgtttatctggaaaccgcacgcaatccttatgggttc
atcggcgggatcgacgcccattgtttcgaagaaggctacctgcgcgaactcatcagcgaa
gtcgcaccggacaaggcccgactgccacggccgtttcgcctggcgatcattcagctgggc
acttatgacggcaccgtctacaacgcccggcaagtcgtcgatcgcatcggcaaactgtgc
gactacatcctgtttgactcggcgtgggtgggctacgaacagttcatcccgatgatgaag
gactgctcgccgctgctgctggacctgcatgaaaacgatcccggcatctttgtcacgcaa
tcggtgcacaaacagcaggcggggttttcccaggcctcgcagatccacaagaaagatcgg
cacatcaagggccaggcccgttattgcagccatgcgcagctgaataacgccttcatggcc
caagcctccaccagcccgttctacccgctgttcgcctcgctggatgtgaacgcgcgcatc
cattccggccgtagcggcctgcgcctgtgggaggactgcgtgaagttcggcatcgacgcg
cgcaagttgatcctggaagcgtgcaccatggttcgcccctttgtgccggacaccattgac
ggtcgcccctggcaggaccaccccaccgaagacatcgccaacgacatccgctttttcgag
ttccatccgaaggatcgctggcacgccttcagcggttacgccgacaagcaatacttcatc
gacccgtgcaagttgctgttcaccacgcccggcatcgacccggtcgatggcagttacacc
gacttcggtatccatgccggcatcctcgccaacttcctgcgcgagaatggcatcgttccg
gaaaagtgcgacctgaactcgattctgttcctgctcaccccggccgaagactgggcaaaa
atgacgcatctcgcctcacagatcgcgcgttttgaacgcttcatcagtgatgacgcgccg
atgagccgggtattgccggccatctatgcgcagcatcaggagcgctatcgcaactacacc
attcgccaactctgccaggagatgcacgacctctaccgcacccacgacgtgcagcatttg
cagaaggcaatgttccgcaaggaacacttcccgaaaaaggcgatgaacccgcaagcagcg
cagttcgaattcatccgtggcaacgtcgaactggtggcgctggctgacgcgcagggtcgc
atcgctgccgaaggtgcccttccctatccacccggcgtgctctgcgtggtgcccggggaa
atatggggcggcgcggtgctcaagtacttcctggcgctggaagaaggtatcaactcgctt
cctggcttcacgccggaactgcagggtgtgtacttgaaacaggaaggcgatcgcattcga
gcctatgggtacgtgatcaagacgctcccacattaa

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