Phytohabitans flavus: Pflav_085350
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Entry
Pflav_085350 CDS
T06516
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla00040
Pentose and glucuronate interconversions
pfla01100
Metabolic pathways
pfla02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Pflav_085350
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pflav_085350
Enzymes [BR:
pfla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Pflav_085350
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BCB82125
UniProt:
A0A6F8Y7Q6
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Position
complement(9050666..9051685)
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AA seq
339 aa
AA seq
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MPRATVLRPALAAALVAAGLTAVTPAAPAQAADTAPIGFAAVNALGQNGTTGGAGGPTVT
ATTTAQFLDYISRPGPYVVQVSGTITLPTGNSDGMHNVASDKTIIGIGANARLVGGGLNI
GVPVDDDMTSPPANAVHNVIIRNLHITGATDDLINVQMFTHHVWIDHNDFSNGDDGAVDI
KRGSDYVTVSWNHFYDHDKTLLLGHDDDNAAQDTGRLRVTYHHNFFDGSDQRNPRVRFSP
LVHVYNNYYDDNSYGIASTMDSGVWAEGNYFYSVNNPGRVDFSGDLGRMVQRDNILVACN
HAIEVRGSVPDPRTYYSYTAGPASSVPTVVPAGAGVGKI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagccaccgtgctccggcccgccctcgccgccgcgctcgtcgcagccggcctc
accgccgtgactcccgcggcgcccgcccaggccgcggacaccgccccgatcggcttcgcg
gccgtcaacgccctcggccagaacggcaccaccggcggcgccggcggccccaccgtcacg
gccaccacgacggcccagttcctcgactacatctcccgccccggcccgtacgtcgtccag
gtctccggcacgatcacgctgccgaccggcaacagcgacggcatgcacaacgtggcctcg
gacaagaccatcatcggcatcggcgcgaacgcccggctcgtcggcggcggcctcaacatc
ggcgtaccggtcgacgacgacatgaccagcccgccggcgaacgcggtccacaacgtcatc
atccgcaacctgcacatcaccggtgcgaccgacgacctgatcaacgtgcagatgttcacc
caccacgtgtggatcgaccacaacgacttctcgaacggggacgacggcgcggtcgacatc
aagcgcggctcggactacgtcacggtctcctggaaccacttctacgaccacgacaagacg
ctgctgctcggccatgacgacgacaacgccgcgcaggacacgggccggctgcgggtgacg
taccaccacaacttcttcgacggctcggaccagcgcaacccgcgggtgcgcttctccccg
ctggtgcacgtctacaacaactactacgacgacaacagctacggcatcgcgtcgacaatg
gactccggcgtctgggccgagggcaactacttctacagcgtcaacaaccccggccgcgtg
gacttcagcggtgacctcggccgcatggtgcagcgggacaacatcctcgtcgcctgcaac
cacgccatcgaggtacgcggcagcgtccccgacccgcgcacctactactcgtacaccgct
ggtcccgcctccagcgtcccgactgtcgtcccggccggcgccggcgtcggaaagatctga
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