Pseudoalteromonas maricaloris SCSIO 43202: CTT31_03175
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Entry
CTT31_03175 CDS
T08529
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pfli
Pseudoalteromonas maricaloris SCSIO 43202
Pathway
pfli02024
Quorum sensing
pfli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTT31_03175
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CTT31_03175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfli03019
]
CTT31_03175
03036 Chromosome and associated proteins [BR:
pfli03036
]
CTT31_03175
Messenger RNA biogenesis [BR:
pfli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CTT31_03175
Chromosome and associated proteins [BR:
pfli03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CTT31_03175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
USE68185
LinkDB
All DBs
Position
1:786065..786328
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AA seq
87 aa
AA seq
DB search
MAKGQSLQDPFLNVLRRERIPVSIFLVNGIKLQGKIQSFDQFVILLENTVNQMVYKHAIS
TVVPARAVNFQNATGSEAGDQGEEGNY
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggccaatctttacaagacccatttttgaatgtcttgcgtcgtgagcgcatt
cctgtctcaatttttttagtgaatggcattaaattacagggcaagatccagtcatttgac
caatttgtgattttgcttgaaaacacagtaaaccaaatggtttacaaacacgccatctcc
actgtggttccagctcgtgcggttaacttccaaaatgcaaccggaagtgaagcgggcgac
caaggtgaagaaggtaattattaa
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