KEGG   Ptychodera flava: 139118834
Entry
139118834         CDS       T10724                                 
Name
(RefSeq) replication factor C subunit 4-like
  KO
K10755  replication factor C subunit 2/4
Organism
pfll  Ptychodera flava
Pathway
pfll03030  DNA replication
pfll03410  Base excision repair
pfll03420  Nucleotide excision repair
pfll03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139118834
   03410 Base excision repair
    139118834
   03420 Nucleotide excision repair
    139118834
   03430 Mismatch repair
    139118834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfll03032]
    139118834
   03036 Chromosome and associated proteins [BR:pfll03036]
    139118834
   03400 DNA repair and recombination proteins [BR:pfll03400]
    139118834
DNA replication proteins [BR:pfll03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    139118834
  DNA Replication Termination Factors
   ELG1-RFC complex
    139118834
Chromosome and associated proteins [BR:pfll03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    139118834
DNA repair and recombination proteins [BR:pfll03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     139118834
  Check point factors
   HRAD17(Rad24)-RFC complex
    139118834
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Rad17 AAA_assoc_2 AAA_16 AAA_11 AAA_22 SoFic-like_C SLFN-g3_helicase AAA_24 AAA_30 Cdc6-ORC-like_ATPase_lid Mg_chelatase RuvB_N DUF815 ATPase_2 AAA_19 AAA_5 Gp44_lid DNAX_ATPase_lid ResIII 7TMR-HDED AAA_7
Other DBs
NCBI-GeneID: 139118834
NCBI-ProteinID: XP_070538431
LinkDB
Position
19:19958547..19976769
AA seq 362 aa
MQAFLKGGSTKVKDKDSKDKAGPSGTSSGSGKRQITPWVEKYRPRSVDEVAYQDDVVAVL
KKTLEGADLPNLLFYGPPGTGKTSTILAAARGLFGADMLKTRVLELNSSDERGINVIRDK
VKRFSQLAASATRPDGKPCPAFKIVILDEADSMTNAAQAALRRTMEKESKTTRFCLICNY
VSRIIEPITSRCSKFRFKPLTTSILTDRLKSIAEKENVICSDEAIKALVTTSEGDLRKAI
TYLQSAHRLKSEEGISENDVYEIAGIIPGTLIDELIAVCYSDSYEKLEKIVKEIMAEGHS
ASQILSQMHDILVQKPDISDKQKSAIAERLAVIDKRLSDGAEEYLQIMDLCTLMMQQFCH
GE
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaagcgtttttgaagggtggtagcaccaaagtcaaggataaggacagcaaagataaa
gctggaccaagtggaaccagctcgggtagtggcaagcgtcagattacaccctgggtggag
aaatatcgtcccagatcagtggacgaagttgcttatcaagatgacgttgttgccgtgcta
aagaagacactggaaggagctgatcttccaaatttgctgttctatggacctccgggtact
ggtaaaacatccactattttagcagcagccagaggactctttggtgccgatatgctgaag
actagagtgctggaactgaattcttcagatgagagaggaatcaatgtcatccgagataaa
gtgaaaaggttttcacagcttgcagcctccgctacaagaccagatggcaaaccatgccca
gctttcaaaatagtaatcctggacgaagcggactccatgacaaatgcagcacaggctgca
cttagacggacgatggagaaagaatcaaagacgacaagattttgtctgatttgcaactat
gtcagtagaattatagagcccatcacctcaagatgttctaagtttcgcttcaagccgctg
acgacatcgattttgacagacagactgaagagtattgcagagaaagagaacgtgatatgc
agtgacgaggcaattaaagcacttgtcacgacatcagagggtgatcttcgtaaagctatc
acttacctacagagtgcacacagactgaaaagtgaagaaggaatctctgaaaatgatgtc
tatgaaattgctggaataataccaggaacactcatagatgaactgatagccgtctgttac
agtgattcttatgaaaaactagaaaaaattgtgaaggaaatcatggcagagggtcattca
gcttcgcaaatattatcccagatgcatgatattctggttcagaaacctgacatctccgac
aagcagaaatcggccattgccgaacgcctcgctgtcattgataagcgcctgtcggacggt
gcggaagaataccttcaaattatggacctttgcaccttgatgatgcagcagttctgtcat
ggagaatga

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