Ptychodera flava: 139121979
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Entry
139121979 CDS
T10724
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
pfll Ptychodera flava
Pathway
pfll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139121979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139121979
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
139121979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_12
TPR_14
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_16
TPR_11
TPR_7
TPR_EMC2
ANAPC3
Motif
Other DBs
NCBI-GeneID:
139121979
NCBI-ProteinID:
XP_070543416
LinkDB
All DBs
Position
21:complement(29839006..29870580)
Genome browser
AA seq
1567 aa
AA seq
DB search
MASGKSKEIKTFMKNAKEAIKNKDYKEVMKNCKAVLKQDKTNYNALVFFGVAAAELDQPD
QARMAYKKAIDTDPKQILAWQGLSGFYEKRDNPEYKTELADAYSKMMAIYEESDMNKWKE
TAKKLAQLYKQMNNDLQAVEIWLIVGNNSSLEDRDRLDAWKGIATILSSLKTIPSEYSEQ
FEKSLQIIVDTAEINDETQKWYQRYIKLLFDKYAFAENAEKFETECKKMAANYPTASVPL
EMLCKFYMQRLQDADSQNAIEAYTQLNERDPSSSMAQCSLGYSKLIKKDYLLARDQLQNG
MKTNQNFLCGWYYLCQSQYHLCDYDGVITSANKGLKLLKNENEMPVENQKKLNHEFNSMF
CVSLVNTRLPNNINKAIEIYQKLLEADETRLDVIIGLGKTYLAINEMDKAREYCEKAVAI
DNKDHAVIAMQGWLEYMQDNLKEAQDRMLEAIESNKNIGLYYHQLGRIYWKMGQDERRNK
TKCFNNFLKAAKLEPYHSDSFLYLGYYYQEIAADINKAKKCYQKTFDLDSRNDEAGAALG
DALIALDEEESALTLYNSVTSKASAGTAKWAWLRLGLYQLKHREYSQSVASFQHALRADP
KDRCCWECLAEAYINRGSYTAALKAFTKATELDPNSIYCHFQIAAIKQTLGLLAEAVTEY
KVILSNSADYVPALKGIGETLISLARSARAEFFNGRVVDYVGEAIRYLSKAVRHRPDVSC
LWKLLGDACTIIHSLDKQLIRIDVPRSLLDRGLKEEELVAMEKMEILSLGAKCYGRALCL
KPEVSSLWHDLGVNYFRQSQEMNCEETVRTEFAKKAMQCLQKAVSMDTNNHVHWNALGLM
AASKAINNPKLAQHAFIKSIQAESNNVVAWTNLGALYYSHHQIELAHNAFKVAQSLEPSY
VACWIGQALVAETIGSEEAMDLFRHTTELATHLEGSVGYASWVCNTIFSEKIDKKSELYK
YNIVEMGAVTSAAVSIGKYTDRKQDDPTASNIHGLLLEQEKLYNQAEKMFARTVRLLKQN
GDKSQLNMALSNYARILCATGKCKESVELYQSISPLSDFNDVCGLALALCKANQLKESYQ
AFEQALQLASSNEEKSRVLASMGVIAYHFQDMERAKTLLFKCSQVSPPCTEGILALCSLA
FLQSDFKLASAALGELLKLGDSEKYAEDICFLTSCLYALQGSYNMAKNQILKAIRKCPWR
AKLWQQAAKFIIQYIPSKAESAATCSKVANKQDFRVSKNSATFALSQLAAGQYRKKDKNS
NALKTAQKMVHLYPNETSHHVLLSASCYADEVRAKAMKQNTHFGNNLNTKLAQFVVQQGE
TMASEGANQAQRQQLIQWATKQTIESLLLSQDYSKTKDFIQSIKQVYKSQAQFTSQLEML
NAKTVFLEMTNGNELELLRNAVLKEAASSEAWQTLAEVYYSQGMMVAAETCYRQSLQVSK
SAKIVPLVRLAYLALMLSVPGDATDKWTALCQQATTEALKLDPQCIAGLLIQGILHFGKN
QRAAKRNLQYVASHGTDYSGSIARFYLMKIYLEKNDTDAIQLLLTDAEKCADPNQEILIQ
LATSVAQ
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggtaagagtaaagaaatcaagacctttatgaaaaatgctaaagaagccatc
aagaataaggactacaaggaagttatgaaaaactgcaaagctgtgctgaaacaagataaa
acaaactacaatgcattggtattttttggagttgctgcagcagagctggatcaacctgac
caggccagaatggcgtacaagaaagcaattgatactgatccaaaacaaatcttagcatgg
cagggtctttcaggattctatgagaagagagacaaccccgagtacaaaacagaactggca
gatgcttacagcaaaatgatggcgatttatgaggagtcggatatgaataaatggaaagag
actgccaaaaagttggcacagctatacaaacaaatgaataatgatcttcaagctgtcgag
atatggcttattgttggtaacaattcaagtcttgaagacagagacagattagatgcctgg
aaaggcatagcaactatcctatcatctctgaaaacaatccccagtgaatattcagaacag
tttgagaaatctcttcagattattgtggatactgcagagatcaatgatgaaacccaaaag
tggtatcagagatatatcaagttgctgtttgataaatatgcttttgcagagaacgctgaa
aagtttgagacagaatgcaaaaaaatggcagcaaactatccgacagcgtcagtccctctt
gagatgctttgtaaattttacatgcaaagactacaagatgctgattctcaaaacgccata
gaagcttatactcaactgaatgagagagatccatcatcatccatggcccagtgctcactt
ggctacagtaaactgataaagaaagattacttgttggcaagagaccaacttcagaatggt
atgaagactaatcaaaatttcctgtgtggatggtattacttatgtcaatctcagtatcat
ctttgtgattatgatggtgtaatcacttctgcaaacaaaggtcttaaattgttgaagaat
gaaaatgagatgcctgtcgaaaatcagaagaaactcaaccatgagtttaattctatgttt
tgtgttagtttagtaaacactagactgcccaacaacatcaacaaagcaattgaaatatac
caaaaacttcttgaagctgatgaaacccggttagatgttataatcggacttggcaagacg
tatcttgccataaatgaaatggacaaagcaagagagtactgtgagaaagctgttgctatt
gacaacaaagaccatgctgtgatagctatgcaaggctggttggaatacatgcaagataat
ctgaaagaagcacaggatagaatgttggaagcaattgaatccaataagaacattggactg
tactaccatcagcttggtagaatttattggaaaatgggtcaagatgaaagaagaaacaaa
accaaatgcttcaataactttctgaaggctgctaaactagaaccctaccactctgatagt
tttctgtatcttggctattattatcaagaaatagcagcagatatcaataaagccaaaaaa
tgttaccaaaagacttttgatttggattcaagaaatgatgaggctggggctgcattgggt
gatgcactgatagcactcgatgaagaggagtcagcattgacactgtacaactcagtgaca
agtaaggccagtgctggtactgccaaatgggcctggcttagattaggactctatcaactc
aaacacagggaatattcccagtctgttgctagcttccagcatgctttaagagcggatcct
aaagacagatgttgttgggaatgcttagcagaagcctacattaatagaggcagttatact
gcagcattgaaagcatttactaaagctacggaactggatccaaattcaatctattgtcat
tttcaaattgcagcaataaaacagactttgggattgcttgcagaggcagtgactgaatac
aaagtcatcctttctaactctgctgattatgtccctgctctgaaaggtattggtgaaaca
ctgatctccttggcaagatcagccagggcagagtttttcaatggaagagtggtagactat
gtgggagaagctatcagatatttgtcaaaagctgtcagacacagaccagatgtatcatgt
ctgtggaaactgcttggtgatgcttgtactatcatccattctctggacaaacagttgatc
agaattgatgtcccaagaagtttactggacagaggattgaaagaggaggaattagttgcc
atggagaaaatggaaatactatcattaggagcaaaatgttatggccgggcactttgcttg
aaacctgaagtcagcagtctctggcatgatttaggtgtcaattacttcagacaatcacaa
gaaatgaattgtgaagaaactgtcagaactgaatttgcaaagaaagctatgcagtgtttg
caaaaagctgtctccatggataccaacaaccatgttcactggaatgctttgggacttatg
gcagcttcaaaagcaataaacaatcctaagctggcccagcatgcattcatcaaatcaatt
caagctgaaagtaataatgtcgtggcttggacaaaccttggtgctttgtactacagtcat
caccagatagagttggcacacaatgcatttaaagtggcccagtcattagaaccatcctat
gtggcatgttggattggacaggcattggttgctgaaaccatcggaagtgaagaagctatg
gatctgttcagacataccacagaattggcaactcatcttgaaggatctgtaggttatgca
agttgggtgtgcaataccatatttagtgagaaaattgacaagaaatcagagctttataag
tacaatattgtagagatgggagctgtgacatctgctgctgtgtctattggaaaatacaca
gatcgcaaacaagatgatcctacagctagtaacattcatggtttactcttggaacaagaa
aagttgtacaatcaggctgagaaaatgtttgccaggactgtcaggctgctaaagcaaaat
ggagacaaaagtcaactgaacatggccctatcaaactatgcaagaatattatgtgcaact
ggtaaatgcaaggaatcagtggaactgtaccagtcaatcagtccactcagtgatttcaat
gatgtctgtggattagctctggctttgtgcaaagctaatcaactcaaggaaagttatcaa
gcttttgaacaagccttacaattggcaagcagcaatgaagagaaatccagagtccttgcg
tccatgggtgtcatagcatatcacttccaagacatggaaagagctaaaactttactgttc
aagtgttctcaggtatcaccaccatgcactgagggaatacttgccctgtgttctttggct
ttccttcaaagtgatttcaaactagcttcagctgctctgggagaacttctgaaacttggt
gacagtgagaagtatgctgaggatatatgctttttgacatcatgtctctatgcactgcag
ggaagttacaacatggcaaagaatcaaattttgaaagcaattcgcaagtgtccgtggaga
gcgaaactatggcaacaagcagccaagtttatcatacaatatattccaagtaaagctgag
agtgctgctacctgtagcaaagtggccaataaacaagatttcagagtatcaaagaactct
gcaacatttgctctgtctcaacttgctgctggtcaatacagaaagaaggataagaacagt
aatgctctgaaaacagctcagaaaatggtgcatctttatcccaatgaaaccagtcatcat
gtattactcagtgctagttgctatgccgatgaagtaagagccaaggctatgaaacagaat
acacactttggaaataatttgaacaccaaacttgctcagtttgttgtacagcaaggggaa
accatggccagtgagggcgctaatcaagctcaacgccaacagctgatacagtgggcaact
aaacagaccattgaaagtctgctactatcacaggattacagcaaaaccaaagatttcatc
cagagtatcaaacaagtttataagtcacaagctcaattcacatctcaacttgaaatgctg
aatgcaaaaactgttttccttgagatgacaaatggaaatgaacttgaattactcagaaat
gctgtgttgaaagaagctgcatcatctgaagcctggcagacactggctgaagtttactat
tcccaaggaatgatggtagctgcagaaacctgctacagacagagtcttcaagtttccaag
tcggctaaaattgtaccattggttagattagcttacctggcattgatgctgtcagtgcca
ggtgatgccactgataaatggacagctttgtgccagcaagctacaactgaagccctgaag
cttgacccacaatgcattgcaggtcttctgattcaaggaattctccactttggtaaaaat
caaagggcagccaaacgtaatcttcagtatgtagcatctcatggtactgattacagtggt
tctatcgctaggttctatcttatgaagatttatcttgagaagaacgacactgacgccata
cagttgttattgactgatgctgagaagtgtgctgacccaaaccaggaaatcttaatacag
ctagcgacatcagttgcacaatga
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integrated database retrieval system
