Ptychodera flava: 139151713
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Entry
139151713 CDS
T10724
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pfll Ptychodera flava
Pathway
pfll03440
Homologous recombination
pfll03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139151713
03460 Fanconi anemia pathway
139151713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfll03032
]
139151713
03400 DNA repair and recombination proteins [BR:
pfll03400
]
139151713
Enzymes [BR:
pfll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139151713
DNA replication proteins [BR:
pfll03032
]
Eukaryotic type
DNA Topoisomerases
139151713
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139151713
FA (Fanconi anemia) pathway
139151713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
Toprim_4
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
139151713
NCBI-ProteinID:
XP_070580775
LinkDB
All DBs
Position
15:26993986..27016485
Genome browser
AA seq
1048 aa
AA seq
DB search
MIFLFTKTSVSKFICHGPVIHKLHLTMSGRITRVLNVAEKNDAAKSLADVMSRGSYSRRE
GFSKFNKIYEWDFNLLNQNCRMTMTSVSGHLMNYEFVGTYQKWHGCNPVMLFDAPIEKYC
SQDFQNIKRTLEREARQCQILVIWTDGDREGENIGYEIIDTCLNVNARLKVYRARFSEIT
PRSISNACRDLGPPDRRVSDAVDVRQELDLRTGAAFTRFQTLRLKKVFPEVLADSLISFG
SCQFPTLGFVVERYKQVKNFIPETFYKIKVTHTTDEGSVDFNWKRHRLFDHTACLVFYQI
CMENPTARVIEVKTKPKSRWRPTPMDTVELEKLASRKLRITAKETMKIAEKLYTQGFISY
PRTETNIFPKELDLRPLIQQQTVDPNWGAFANGILQHGPNPRQGKKTDNAHPPIHPIKYT
NTLSGNESRVYELVVRHFLACCSQDAQGRETTVEIDIAEERFTVQGIMIIARNYLDVYPY
DKWNAKVIPVFQQGEEFQPTAIEMVDGETSPPPLLTEADLISLMEKHGIGTDATHADHID
TIKSRNYVGLTNDSRFVPGELGIGLVDGYNNMGYELAKPDLRAAFEAELVEICEGRKDRD
NVLREQIAKYKSVFVEAVEKANRLDEALSEYFGEAHQYTADEIQHSDISMPVRPCPHCNK
AMVIKSKKDGGQMLSCTGFPDCKTAVWFPASVEKASLEDSICSQCQPGPVHKIKFKFRRG
SVPPGYPAEYICCIGGCDTALTELGFNLSYLRTNTSSGSTSRQNSSQRGGRSRIPSGRSS
FGSQDSGYNSSFTSSGNSTRTPGFLSTGQRGGGSSQRGRGRGGGAGRGGPSQGMDRQPLG
SIASRFNTNNSSDSAIVCNCNEDARILTVRKEGPNCGRQFYKCANGACDFFLWAESDTTA
TNTSNSLPSWGGSGFGNSSNERGGNSDTQRGSSANAWGEVVCRCNQPAVKRTVQKEGPNK
GREFWTCPKPRDNQCGFFEWTDGVGNTNAGFGGNSRGFGNSGRGRGGQRSNWNSRNENDG
GGNPKKRKTVTCGICGQEGHTRRTCPQR
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgatttttctcttcacgaaaacaagtgtctcgaaattcatttgccatggtcctgtgatt
cataaattgcacttgacaatgtctggcagaattacacgggtgctgaacgtagcggagaaa
aacgatgcggcgaagtcgcttgcagatgtcatgtcaagaggcagctatagcaggagggaa
gggttttccaagttcaacaaaatctatgaatgggattttaatcttttaaatcaaaactgt
agaatgacaatgacatctgtgtctgggcatctcatgaactatgagtttgttggaacctat
caaaagtggcatggctgcaaccctgtaatgctatttgatgcaccaattgaaaaatactgc
tctcaagattttcagaatattaagaggactttggaacgagaagccaggcagtgtcagata
ctggtaatatggacagatggcgaccgagagggagaaaacataggatatgaaatcattgat
acctgtctgaatgttaatgcaagattaaaagtttacagagcaagattctcagaaattact
ccaaggtccatcagtaatgcatgcagagatcttggtccacctgatagaagggtatcagat
gcagtggatgtcagacaagaactggatctcagaaccggtgctgccttcacaagatttcaa
actctcagactgaagaaagtctttcccgaagtcttagccgacagtttaataagctttggg
tcatgtcagtttccgacactgggatttgttgtggaacgctacaaacaagtgaaaaacttc
ataccggaaacattctataaaataaaagtgactcatacaactgatgagggcagtgttgat
ttcaattggaaacggcacaggctgtttgaccacacagcatgcttggtgttctatcaaata
tgcatggagaacccaacagctagagtcattgaagtgaaaaccaaacctaagagcagatgg
agaccgacacccatggacacagtggaacttgaaaaacttgcgtctagaaaacttagaatt
acagccaaggaaaccatgaaaattgcggaaaaactttacacacaggggttcatcagttac
ccacgtactgaaaccaacattttcccaaaggaacttgatctaaggcctttgatacaacaa
cagacagtggatcccaactggggagcatttgccaatggaattctgcaacatggaccgaat
cccaggcaaggaaagaaaactgataatgcccatcctccaatccatcccatcaagtacaca
aacaccttgtcaggaaacgagagccgtgtctatgaattggttgtaaggcatttcctagcg
tgttgctcacaggatgctcaaggtagagagactacggtggaaatagacatagcagaggaa
aggttcactgttcagggcattatgatcattgcaaggaattacttagatgtctatccctac
gacaaatggaatgccaaagttatccctgtcttccaacaaggagaggaattccagcccact
gcaatagagatggtggatggagagacatccccacctccactactgacggaagctgatttg
atttcattgatggagaagcatggcataggtactgatgccacccatgcagatcacattgat
accattaagagtcgcaattatgttggtttgaccaacgacagtagatttgtaccaggcgag
ctgggcattggactggtggatggttataacaatatgggctatgagttagccaagccagac
ctcagagctgcttttgaagctgaactggttgagatctgtgaaggaagaaaagacagagac
aacgtactcagagaacagattgcaaaatacaaaagcgtttttgtagaagctgttgaaaag
gcaaacagattggatgaagcactgtctgagtattttggtgaggcacatcaatacacagca
gatgaaatacaacacagtgatatatccatgccagtgagaccctgcccgcactgtaacaaa
gccatggtcatcaagtcgaagaaagatggcggtcagatgctaagttgtacaggcttccct
gattgcaagacagccgtgtggttcccagcatctgttgaaaaagccagcttggaagattcc
atttgtagtcagtgtcagccgggaccggttcacaaaatcaagttcaagttcaggcgtgga
agtgtaccaccaggctatccagcagagtatatttgctgcatcggtggatgtgacactgca
cttactgagttaggatttaatttgtcctatcttagaacaaacacttcttcagggtctacg
tcaaggcagaactcgtcccagaggggcggccgttcaaggataccatctggaagatccagc
tttggctctcaagattctggctacaacagcagcttcacaagctctggcaacagcaccagg
acaccaggcttcttgtccacaggacaacgtgggggcggtagcagccagaggggcagagga
agaggaggaggagctggaagaggagggcccagccaaggaatggacagacagcctcttgga
tctattgcatccagattcaacacaaataattccagtgatagtgccatagtttgtaactgc
aatgaggatgccaggatactgacagtgcgtaaagaaggaccaaactgtggacgacagttt
tacaagtgtgccaatggagcctgtgatttctttctgtgggcggaatcagacaccacggct
acaaacaccagtaattccctccccagttggggtggcagtggctttgggaacagcagcaat
gagagaggaggcaacagtgatacgcagaggggtagtagtgccaatgcgtggggtgaagtg
gtttgtcggtgtaaccaaccagctgtcaagcgaactgtgcagaaagaaggtccaaacaaa
ggtcgcgagttctggacttgtcccaagcctcgtgacaatcagtgtggcttctttgagtgg
acagatggtgttggaaacacaaatgcaggctttggaggcaattccagagggtttggcaat
tccggtagaggtaggggaggacaacgcagtaactggaattcaaggaatgagaacgacggt
ggtggaaatccaaagaagaggaaaacagtcacctgtggaatctgcggccaagaaggtcac
acaagaagaacatgccctcagaggtga
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integrated database retrieval system
