Perca flavescens (yellow perch): 114547436
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Entry
114547436 CDS
T07494
Symbol
abca1
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv02010
ABC transporters
pflv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114547436 (abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114547436 (abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pflv02000
]
114547436 (abca1)
Transporters [BR:
pflv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114547436 (abca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
114547436
NCBI-ProteinID:
XP_028422617
LinkDB
All DBs
Position
2:complement(17455515..17499004)
Genome browser
AA seq
2271 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPYEQHQCHFPNKA
MPSAGSLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSIISRLFIDAKKILLYSQNDK
SYEGYKGLLRALKKLQKNSARFKLKDFLQDDETLSHFLHHNASLPHHALKQIVEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADRNVSRLTQEIICNSSSDWLNKAQSHFLSNLDF
LKPIRKDVKSDPKVVQDVSAATDNLLESLGALAVEFASMKSWNDMRKEILYLTANATDSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSESEPFSAYDNSSTPYC
NNMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIQEVNKTFQEFGVLRDIGGM
WEEMRPKVWNFMENGEEMDMVRTLLQNNASAAFFNAQLSGTEWRVSDVSAFLSKVSEDQR
PAGSAYTWRDVFNETDHAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLNNQKFWAGI
VFPDITHSSSADLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSY
LQDIIERGIIRAITGTKEKIGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLRETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGSLLPYSDP
GVVFLFLGSFGIVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KLIVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSISLMLFDAVLY
GIMTWYIENVFPGQYGIPRPWYFPFTKSYWCGEKENNNISTPLSKKGNAEAVCIEEEPSH
IEPGVYIENLVKVYSHGKKLAVDGLSLRFYKGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYIHGKDIRSELSAVRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAETEQ
ILNDVGLPHKRKSLTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRPGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDY
DLTLQSCRNSASTVSYSKKAGKEDSVSESSSDAGLGSEPESETTTIDVSLISNLIFKHVH
EARLVEDLGHEITYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDAVELSDGVVPTRIRRHHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLSGT
DGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLVLDHSMYGEQFTFISNDMPENPHINKILGALTENPGFGTHCMEGQTIQDTPCTA
VKDEWSVPEVSQSVKDMFANGNWSMENPSPMCECSCGGRKRMLPECPAGAGGLQPPQMKI
SDQDTLQNLTGRNISDYIVKTYAQIIGKSLKNKILVNEFRYGGFSLGAMSSQLMSHTDEI
DDAIIQLKRRFHLERGTAADRFFSSLSNFIQGLDTKNNVKIWFNNKGWHSIGSFLNVLNN
GILRASLQAGQDPTKFGITASNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVNKAKHLQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFICFQQDAYVS
STNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNEVGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGK
NLFAMAIEGVIFFGITILIQYHFFFKARSSTSHLKPIGEEDEDVARERQRILSGGGQSDI
LELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSLVTGGEAF
LAGKSVTTEIHEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPD
LRPAMEFIERELPGSTLKEKHRNMLQYQLPTSLTSLARIFSLLSQNKEALSIEDYSVSQT
TLDQVFVNFAKDQSDEDHLKEAHLNKLDAVVVDISQLNTFLTDNKTRESCV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcaactgggtttactgctttggaagaactttacctaccgacggaga
cagactatccagctgctgattgagatcatctggcccctgtttatcttcttcatcctaatc
tcagtccgaatacattatccaccctacgagcaacatcaatgccatttcccgaacaaggcc
atgccctcagcggggtccctgccctgggtgcaaggcatcatctgtaacgccaacaacccg
tgctttcgtaatcctacccctggcgagagtcccggggtggtgggaaactttaatgattct
ataatctcccgattgttcattgatgccaagaagatcctgctctactcacagaatgataaa
agctacgagggctacaagggactgctgagggccctcaagaagctgcagaagaacagtgct
cgtttcaagctgaaggactttttgcaagacgatgagacgctttcccacttcctgcaccac
aacgcctcacttcctcatcacgcgctgaagcaaatagtggaagctgacgtcaatctggag
aaggtgctgactaaaggttttggctttcatctcagagacctctgtaacaccacgcccctg
gaggagtttgtccacattgccgatcgcaatgtttcccgtctgacgcaagaaattatctgc
aattcctccagtgattggctaaacaaggcccagagccactttctgtccaacttggacttc
ctcaaacctatccggaaggatgtgaagtcggaccccaaagttgttcaggatgtctcagct
gcaaccgacaatcttctggagagcctgggagcactggccgtggagtttgccagtatgaag
agttggaacgacatgcgtaaggagatcctgtatctaactgcaaatgccacagactctcca
aaccagatgtaccaggctgtctcacgtatcgtctgtggacaccctgagggaggcggcctc
aaaatcaagtctctcaactggtatgaagacaacaactacaaggccctgtttggaaaccat
ggcaacgacagcgagagtgaacctttctcagcttatgacaactcttccactccctattgt
aacaatatgatgcggagcctggagtccagccccatttccaggatgatctggagagctctg
aagcctctgctcatgggcaagatcctgtacaccccagatactccagccacacagagaatc
atccaggaggttaataagaccttccaggagttcggcgtgctgagggacatcggagggatg
tgggaggaaatgaggcccaaagtttggaacttcatggagaatggcgaggaaatggacatg
gtcaggaccctgctccagaataacgccagtgccgcgttctttaatgcccagctcagtggg
actgagtggcgtgtgtcagatgtgtcagccttcctgtctaaggtctcagaggaccaaaga
cctgcaggatcggcctatacctggagagacgtcttcaacgaaactgaccatgccatacag
accatctcacgcttcatggagtgtgtgaacctggacaagctggagccagtagctaacgag
gagaggctggtcaacaagtccatgggtcttctgaacaaccagaagttctgggctggaatt
gtgtttcctgacatcacccatagcagcagcgctgacttgcctcccaacgtaaactataag
atacgcatggacattgataatgtggagaggacaaacaagattaaagatggctattgggac
cccggtcccagggcagacccctttgaggaccttcggtacgtctggggcggattttcttac
ctgcaggacatcattgagcgtggaatcatcagagccatcactggcaccaaagagaagata
ggcatctacattcagcagatgccctacccctgctatgtcgatgacattttcctgcgggtg
atgagtcggtcaatgcctctcttcatgaccctggcatggatgtactcggtagccatcatc
atcaagggcgtggtgtacgagaaggaggcccggctcagagagaccatgaggatcatggga
ctgaacaacggcaccctgtggctcagctggttcatcagcagtctaatcccgctcctgatc
agcgccggcttgttggtgatgttgttgaagatgggaagcctgctgccttacagtgaccca
ggcgtggtgtttcttttccttggatccttcggcattgttaccatcatgcagtgtttcctc
atcagtaccctgttctctcgtgccaacttggcagccgcctgcggtggcattatatacttc
acgctctatctgccctacgtgctgtgtgttgcctggcaggactacgtgggctttggagca
aaacttatagtgagtctgctgtctccggtggcttttggttttggctgtgagtactttgcc
ctgtttgaggagcaaggagtgggtatccagtggtcgaacctgctggccagccctctggag
gaagacagttacaacctgaccacctctatcagcctcatgctgtttgacgctgtgctctac
ggaataatgacctggtacatcgaaaatgtgttccctggtcagtatgggatccccaggcct
tggtatttccctttcactaagtcgtactggtgtggagagaaagagaataacaacatctcc
acccctctgtcaaagaagggcaacgctgaagctgtgtgtattgaggaggagccgagccac
atcgagcccggtgtttacatcgagaatctggtgaaggtctacagccatggaaaaaagctg
gctgtagacggactgtccctgaggttctataagggacaaataacctccttcctcggtcac
aatggagctggcaagaccacaactatgtcaatactgacgggattgtttccacccacatct
ggcacagcctatatccacggcaaggacatccgcagtgaactcagcgctgtccggcagaat
ctgggcgtctgtccccagcacaacgtacttttcagcatgctgacggtagaggaacacatc
tggttctacgcccgtctgaagggactgccggaggagaaggtgaaggctgagacagagcaa
attttgaacgatgtcggactgcctcacaaacgaaagtctctcaccagcacgctgtctgga
gggatgcagaggaagctgtcagtggccctggcttttgtcgggggctccaaggttgtgatc
ctggatgaacctactgccggggtcgatccatacgcacgcaggggcatctgggacctgctg
cttaaatacagaccaggccgcaccatcatcctttccactcatcacatggacgaggctgac
atcctgggtgaccgcatcgccatcatttcccacggcaagctgtgctgcgtaggctcctcg
ctcttcctgaagacccatctcggcacgggctactacctgaccctggtcaagagagactac
gacttgacacttcagtcctgcaggaattctgccagcaccgtctcctacagcaagaaggcc
gggaaggaggacagtgtatcagagagcagttcagatgccggtcttggtagtgaaccagag
agtgaaaccaccactattgatgtgtccctcatctccaacttgatattcaagcacgtccac
gaggctcgcctggttgaggaccttggccacgaaatcacctatgtcttgccctaccagtca
gctaaagatggagcctttgtagagctcttccacgagctagatgaccgactcaccgacctg
ggaatatctagctatggaatatctgataccaccctggaggagattttcttgaaagtggct
gaggacagtggagtggatgctgttgagctatcagatggagtcgtgccaaccaggattcgt
cgccatcatgcatttggagaccaccagagttgtctgaagcccttcactgaggatgacttt
gatttcaacgactctgaaggtgacccagaatcccgtgagaccgactggctcagtggaaca
gatggcaaaggctcataccaggtcaaaggctggagtctgaagagacagcagtttgttgcg
ctactctggaaacggttcctctacgctcggcgctccaggaaaggcttctttgctcagatt
gttcttccggctgtgtttgtgtgtattgccctggtgttcagtctgattgtccctccgttt
ggaaagtacccaagtctggttctggatcacagcatgtatggagaacagtttaccttcatc
agtaatgacatgcctgagaaccctcacatcaacaaaatactgggagctctgacagaaaac
ccaggatttggaacacactgcatggaaggacaaaccatacaggacactccctgcacagca
gttaaagatgagtggtcggtcccggaagtctctcaaagtgtgaaggacatgttcgccaat
ggcaactggtccatggagaatccctctcccatgtgtgagtgcagctgtggaggacgcaag
aggatgcttccggagtgtcctgctggcgctgggggacttcaaccaccacagatgaagatc
agcgaccaagacacacttcagaatttgactggcaggaacatctcagactatattgttaaa
acctacgctcagatcattggcaagagtctgaagaacaagattttggtcaacgagttcaga
tacggtggcttctcgttgggcgccatgagttctcagcttatgtcccacacagatgaaatt
gatgatgcgatcattcaactgaagagacgtttccatcttgagagaggaactgcagcggat
cgtttctttagcagtctctccaattttatccaaggattggacactaagaataacgtcaag
atctggttcaacaacaagggctggcacagcatcggttcttttctcaatgtcttgaacaac
ggcatcttgcgggcaagtctgcaagctggccaagaccctacaaagtttggcattactgcc
tccaatcatccgctcaacctcaccaaggagcagctgtcacaggtcgcattgatgacgaca
tcagtagatgtgctggtttccatatgcgtgatcttcgccatgtcctttgtccctgccagt
tttgttgttttcctcatccaggagagagtgaacaaggctaaacacttgcagttcatcagc
ggagtgcagcctttgctctattggctggccaactttgtctgggatatgtgcaactacatc
gtcccggccacactggtcatcattatcttcatttgtttccaacaagacgcctatgtctcc
tccaccaatctgcctgtgctggcgctgctgctgctgctctacggatggtcgatcacccct
ctgatgtacccagcctcgttcttctttaagatccccagcactgcctacgtggttttgacc
agcgtcaacatcctgataggaatcaacggcagcgtctccacatttgtcctggagctgttt
ggaagcaatgaagtcggtggcatcaacgacatcctgaagaacgtgttcctcatcttccct
cacttctgtctgggcagaggactgatcgacatggtgaagaatcaggcaatggccgacgct
ctggagagatttggggaaaaccgattccgctcccctctggcctgggacatggtgggaaag
aacctgtttgcaatggccatagagggcgtaatcttcttcgggatcaccatccttattcag
taccacttcttcttcaaggccaggtcgtccaccagtcatctgaagcctattggggaagaa
gatgaggatgtggccagagagcgacagaggatcctgagcggaggaggacagtcagacatc
ctggagctcagacagctcaccaagatttacaagaggaaacagaagccagcagtggaccgg
ctgtgtgttggcatcccccctggagagtgctttggtttgctgggagtgaatggcgcaggg
aaaaccagcacctttaaaatgctgacgggagactctctggtcaccggtggagaggccttc
ctggctggcaagagtgtaactacagagatacatgaggtgcatcagaacatgggctactgt
cctcagtttgatgccatcaacgacctgctgaccggcagagagcacctcgagttttacgcc
atcctgagaggtgtgcctgagaaggaagtctgtgaggtagcagagtggggcatccggaag
ctgggcttggtcaaatatgtggacaagtcagcaggtagctacagtggaggaaacatgagg
aagctgtctactgccatcgctctcataggaggaccacctgtagtctttctggatgaacca
accacaggcatggatcctaaagcacgtcgtgctctgtggaacgcaatcctgagcatcatc
aaagagggacgatctgtagtcctgacctctcacagcatggaggagtgtgaggcactttgc
accagaatggccatcatggtcaacggcaggttccggtgtctgggcagtgtgcagcacctc
aaaaacaggttcggtgatggctacaccatcatcctgcgggtggctggcccagacccagac
cttcggccggcgatggagttcatcgagcgggagctgcctggcagcacactgaaggagaaa
caccgcaacatgctgcagtaccagctgcccacctccctcacctccctcgcccgcatcttc
tccctgctctcacagaacaaggaggccctcagcatagaggactactccgtctcacagact
actttagaccaagtgtttgtaaatttcgccaaggaccaaagtgatgaggaccatttgaaa
gaggcccatctgaacaaactggacgctgtggtagtggacatttcccagcttaacactttc
ctcacagacaacaagaccagggagagctgtgtctga
DBGET
integrated database retrieval system
