Perca flavescens (yellow perch): 114550107
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Entry
114550107 CDS
T07494
Symbol
cntn1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04514
Cell adhesion molecule (CAM) interaction
pflv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
114550107 (cntn1)
04517 IgSF CAM signaling
114550107 (cntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflv04515
]
114550107 (cntn1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pflv00537
]
114550107 (cntn1)
Cell adhesion molecules [BR:
pflv04515
]
Immunoglobulin superfamily
Contactins
114550107 (cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pflv00537
]
Others
114550107 (cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_4
Ig_PDGFR_d4
Pur_ac_phosph_N
PsaS
Motif
Other DBs
NCBI-GeneID:
114550107
NCBI-ProteinID:
XP_028426448
LinkDB
All DBs
Position
23:complement(14961570..14974212)
Genome browser
AA seq
1042 aa
AA seq
DB search
MPSAALLLLALSSSVSLTVAVLFGEPRIFGDDATGYGPIFEEEPVDVVYTEDSPDGRISM
NCRARANPPASYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPRQKKHAGTYICVARNIY
GTVISKEARVKFGFVEEFPQEERDPVYVKEGQGAVLLCAPPKAWPQEVTYRWIFNEFPVF
LHTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPVTGKSVFSKFIPLIPLPPDDGEER
KYPADIRVKFPDTTAMLASNITMECFALGNPIPHIVWRKVDHTDLPPNHEISESGAVLHL
YNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETINNTQMDIGSEHTMRCVASGK
PFPFIRWYKDGYMYGKGELKFSSLTFDDSGMYQCIAENYWGIKYANAELRVISCAPTFEF
NPVRKQLLGAKDGRVVIECKPRAAPRPRYTWKKGKELLFNNSRISIMFDGSLEILNATTN
DEGVYTCFAENDKGKANSSGYLTITEATSITEPPEDTEVKVGDEVILRCAASYDPMLDIT
FIWSIDFRVIDFDSEWQHYERDMSEDGSGDLRIKNVQIWHEGRYHCTAQTVVDSDTAYAD
LKVVGVPGPPGVIRVEEIGDTWVKLLWTKGAEHNSPILSYTIQTRHFWALNEDDWKDAST
SPTFLDGNADRAEVTDLYAWMEYQFRIIATNEYGSGEASIPSLKIKTWDAPPVISPTDVA
GYGGRNGEIVITWNPVQPWYFYGKKFGYIVAFKPHDAYDWWYETISDPETRRYVHRDSYF
IPTDEDFQVREFQVKIKSFNVKGDGPYSLTKVIYYPRDVPVESPTDVYARPVSSTEALVW
WLPVVDTGTGLQQYIEGYQVKYWRKYDDPEPGANRIFVSATVNQTRLENMLPDSHYLIEV
RAFNGAGLGPPGEHCEMFTKRPPPPEPPRMWRYVTWTGQWLYVWWDHIQYDWFGNISFPL
YYKVMFRKTGYYYGKVYVTGWHFMDFPMPQFGDYELMVRGRYEGGDGPIRKISIKGKASM
ITPTLSLASLVLLALCIVGLEM
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgctgctttactgctgctggccctctcctcctcagtctccctcacagtggcg
gtcctatttggcgagcctagaatttttggagatgatgccactggatatggcccaatcttt
gaggaggagcctgtggatgtggtgtacactgaagactcacccgatgggagaatctccatg
aactgcagggcacgagcgaacccacctgcctcatacaggtggcgccgtgataactgggaa
atcaagctgatggagcagccggacgaacactacagcctcgtgggggggaacctggttatc
accaaccccagacagaagaaacacgctgggacgtacatctgcgttgccaggaatatctat
ggcactgtcatcagcaaggaggccagggtcaagttcggatttgtggaggagtttccccag
gaggaaagagacccagtgtatgtcaaagaaggacagggggctgttctgctgtgtgcccct
ccgaaagcctggccacaggaggtgacctaccgctggatcttcaatgagttcccggttttc
ctgcacacagaccgccgacggtttgtctcccagaagacggggaacttgtacatctccaaa
gtggaagctcaggacgcaggaaactactcctgttttgtttccagccccgtcaccgggaag
agcgtcttctccaagttcattcccctcatccccttaccccctgacgatggtgaggagaga
aaatacccagcagacatcagggtgaagtttccagatactactgccatgctggcctctaat
attacaatggagtgttttgctctgggaaaccccatccctcatattgtttggaggaaggtg
gaccacacagacctcccaccaaaccatgagatcagtgaatcaggagctgtgcttcatctg
tacaatgtacagtacgaagatgtgggaggatatgagtgtgaagccatcaacactaaagga
aaggactggcacaaggcctggctgtacgtggagtctgctccagagtgggccgaaaccatc
aacaacactcagatggacattggctcagagcacacaatgcgctgtgtggcatcagggaag
cccttccctttcatccgctggtacaaagatggatatatgtatgggaagggggagttgaag
ttttccagtctcacttttgatgactcaggaatgtaccagtgtatcgctgagaactactgg
ggcatcaaatacgccaacgctgagctgcgagtcatctcctgtgctcctacattcgagttc
aaccctgtaaggaagcagcttcttggagcaaaagacggtcgcgtggtgatcgagtgtaaa
ccccgagctgctcctaggccgcggtacacctggaaaaaggggaaagagctcctcttcaac
aattcccgcatttccatcatgtttgatgggagtctggagatcctcaacgccaccaccaat
gatgagggcgtgtacacctgctttgctgagaatgacaaaggaaaggccaacagctcgggc
tatctcaccatcacagaggctaccagcatcacagaaccacccgaagacactgaggtaaag
gttggggatgaggtgattcttaggtgtgccgcttcatacgaccccatgctggacatcaca
ttcatctggtccatagacttcagggtcatcgactttgactcggagtggcaacactacgaa
cgcgatatgagtgaagatggcagcggtgacctgagaataaagaatgtccagatttggcac
gaaggtcgctatcactgcacggctcagacagtggtggacagcgatactgcatacgctgac
ctcaaggttgtaggtgttcctgggcctcccggtgtgatccgggtggaggagatcggggac
acgtgggtgaagctgttgtggactaaaggagccgagcacaacagccccattctctcctac
acaattcaaaccagacacttctgggccctgaatgaagatgactggaaggatgccagcacc
agtccaacctttcttgacggcaacgcggacagggcagaagtgacagacctgtacgcctgg
atggaatatcagttcaggatcatcgccaccaatgagtacggctccggagaggccagcatc
ccctccctcaagataaaaacctgggatgctcctccagttatttctcccactgatgtggcg
ggttatggaggtagaaatggcgagatcgtcatcacatggaatcccgtgcagccgtggtat
ttctacgggaaaaagtttggctacattgtggcatttaagcctcacgatgcttacgactgg
tggtacgagaccatttcggaccccgaaacgaggcgttacgttcacagggactcctacttc
attcccactgatgaagatttccaggtcagggagtttcaggtgaagatcaagtcatttaat
gtcaaaggagacggaccatacagcctcaccaaggtcatctactacccaagagatgtacct
gtggagtctccgacagacgtctatgccagaccggtgtcctccactgaagctctggtctgg
tggttgcctgtggtcgacactggtacaggcctgcagcagtacattgagggataccaggtc
aaatactggaggaaatatgatgatccagagccgggagcaaaccgtatatttgtttcagcc
acagtcaaccagaccaggttggagaacatgctgccagactcgcactacctcattgaggtc
cgtgccttcaatggagccggcctcggaccccccggtgaacactgtgagatgttcacaaag
aggccaccaccaccagagcctcccaggatgtggcgctatgttacctggacaggacagtgg
ttgtatgtgtggtgggatcatatccagtatgactggtttggcaatatttccttcccactg
tactacaaggtgatgttcagaaagacaggctactactatgggaaagtctacgtcactggc
tggcacttcatggacttccccatgcctcagtttggagactatgagctgatggtacgcggc
cgttatgaagggggagatggcccaatcaggaaaattagcattaaaggtaaagcatcaatg
atcacgccaactctaagcctggcatctttggtgctgctggctctgtgcattgtgggattg
gaaatgtaa
DBGET
integrated database retrieval system