Perca flavescens (yellow perch): 114555479
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Entry
114555479 CDS
T07494
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114555479 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114555479 (ttc37)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
114555479 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_19
TPR_14
TPR_8
TPR_17
TPR_11
TPR_12
TPR_9
TPR_CcmH_CycH
ANAPC3
TPR_7
HAT_Syf1_CNRKL1_N
PknG_TPR
Fis1_TPR_C
TPR_15
YceG_bac
Motif
Other DBs
NCBI-GeneID:
114555479
NCBI-ProteinID:
XP_028433690
LinkDB
All DBs
Position
5:34941401..34965119
Genome browser
AA seq
1576 aa
AA seq
DB search
MKIANYKMSNKEVKAALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASEL
EQPDQSQTAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKVELPNIYQKLVELYASSDKN
KCYEIISKLSEIYQSEKEYLKLAKVWLQLIQVKEEEAVDKKELLQLWQQMTQLLSDCINE
EEQDNNETQQHLITAFEKAMVLMDPVPGEEHKKLSADYVKCLSKLPQEEAKMKQACESML
SLYPNQSYPLEVLCSYYLKTGVQNVDAVGCFSRLLDLAPNSGLGHLGLGTKALQEGRFKD
ATKDLAQGLKKMSSSTGWCSLAEAQFKMQRYSDSAMSCSQGLTVCVSGDKELRVKLLRLK
LEALVRSGGEASAYQALETFSQIPDSEKDPVLVALRGRAYLNKGQVDEALKVSSELVASN
PNLAQGLVLRGLAQLAQGQQQLAEESFLKAASQSPDCAEYYFLLGKLYWDMGEETRKDRS
KAHTHFLKAAKFDPHLGCVFRYLGHYYREVANDHGRARGCYKKAFEMDDDDAESGAASVD
LSMEQDDMDTALAILQSVIEKATPGSAKWAWMRRGLYHLKVGDHQQAIADLQAALRADPE
DWVCWECLGEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYL
QITAQQDYVPALKGLGECQLSLAKGLMEDCRDGGAIDLIQQAIQNLFRAVVLRPDLSCLW
KLLGDACTAVSSVSSNRAQVLVPALLAGLDTNTQSHALNQAQTLKVGERCYVRALKLMSE
VPTLWYDLGLNYYRQSSVPRPDDVDQNSQSLLLVKAQQCLKKAIMMDSGTHSYWNALGVI
SMSKGLENFALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLY
VNCWIGQALIAERVGSYDTMDLFRHTTELSTHMEGVKGYTFWVCSTLLDKSNRDSELYRY
NIVQMNAISAAQVALSKYTERIQSDPDAFIMLGYMNEHLQLKRQAIQAYKRAVELLQSMS
STEQLTFALCSYGRALCTSGQSEEAVRVYNSTPLQDLSDLAGLALAYCRAGLIPESISAY
ERALAVASIEKEKAYILTAVALLQHRQGNLDSAKTLLFKCSMLKEPIAESLLCLSALGLV
HSDATLAAAALAELLKQGPASGKVTEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNP
SLWALLSRLIPQYYPRKANGGAMAGHVACLSSMTQGKRALLYSGVNQLASGRHSEENSHR
NALKTMQRAVLLCPDDPATWAGLMAACHTENTSCYLSGSAPCRRGLEQTLMSVVSEKVHN
VEEIERPLAQTLKGWVLQQAVSGLTLGGQLEQAEALCTQVLNVSPEHPAVMLSLRQVQCQ
RLLLAGGGTALPDSVLEQLNNTVMMNPTNLGAWHWLAEVYRSQGLLVQAVLAYRQSLQLA
SQLGLHSSQVATLLRLALLALEPCLAGVPRKDWTDMILEATTEVLKLGSSPMALLFQALL
QYVTKMAARETRRLLERLAYSQDFPVTVVQVASWYLLRHLHAKNDQELINVLLQHAKMNG
DQRLLEFHSLLASSST
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagctaattacaagatgtctaataaagaagtgaaagcagcactaaagagtgcc
agagaggccatcaaaaacaaagagttcaaagaggctctaaaacactgcaaggctgttttg
aaacttgagaagaacaattataatgcatgggtattcatcggcttggcagccagtgaactc
gagcaaccagatcagtcccagacagcctataaaaaagctgtggagctggagcctgagcag
cttctggcatggcagggcttggcaaacctttatgaaaagactgatcagtgggatttcaaa
gttgagctacctaatatctaccagaagcttgttgagctgtatgcaagctccgacaaaaat
aaatgttatgagatcatcagtaagctgtcagaaatctatcagtctgaaaaagaatattta
aagttggcaaaggtttggctgcagctcattcaggtgaaggaggaagaggctgtggataag
aaagagctactgcagctatggcaacagatgacgcaactcctctcagactgcattaatgag
gaagagcaggacaacaatgaaactcaacagcatttaatcacagcatttgaaaaggccatg
gttctcatggatcctgtaccaggagaggaacacaagaagctctcagctgactatgtcaaa
tgcctttctaaactgccacaagaggaagccaaaatgaaacaggcatgtgagtccatgctg
tccctctaccccaaccaaagttatcctcttgaagtcctttgctcttactacctcaaaaca
ggtgttcagaatgtggatgcagtcggctgtttctcccggctcctggatctggcccctaac
agcggattaggtcacttgggtctgggcaccaaagcactgcaagaaggaaggtttaaagat
gccactaaggaccttgcacaagggttaaagaaaatgagctccagcacaggatggtgcagt
ctggctgaagcccagtttaaaatgcagagatactcagacagtgctatgtcatgctcccaa
ggtctgacagtgtgtgtttccggagacaaggagctgagggtcaaactgctgaggctgaag
ctagaggctttagtcaggagtggaggagaagcgtctgcctaccaggctttggagacattc
tcacagatcccggactctgaaaaagacccagttctagtagccctgagaggacgtgcatac
cttaacaagggacaagttgatgaagcacttaaggtatcatcagagctggtggcctctaac
ccgaacctggcccagggcttggtactgagaggactggcacagttggctcaggggcagcaa
cagctggcagaggagagttttctaaaggcggctagccagagcccagactgtgcagagtat
tatttcttgctgggaaaactctactgggacatgggagaagagacccgtaaggaccggagc
aaagcccatacacattttctcaaggctgcaaagttcgacccacaccttggttgtgtattc
cgctacctcggacattattaccgggaggtggcaaatgatcatggccgggcacgaggctgc
tataagaaggcctttgagatggatgacgatgatgcggagtctggagctgcctccgtggat
cttagtatggagcaggacgacatggacactgccttagcaatactccagtcagtgattgag
aaagccactcccgggtcagcgaaatgggcctggatgagacgagggctgtaccacctgaag
gttggggaccatcaacaagctatagctgatctgcaggcagctctgagagcagaccccgag
gactgggtgtgttgggagtgtttaggcgaggcctacttgaaccgccggagcttcacagca
gctctgaaggcctttggtaaggcccatcagcttcaaccctcctccatctacagtgtctac
caggctgctgctattaaacagaccctgggcaagttcaaagaggcagttgcagagtacttg
cagatcacagcacagcaggactatgttcctgctcttaaaggtcttggggagtgccagctg
tctctggcaaaaggtttgatggaagactgtcgagatgggggagccattgacctcattcag
caagccatacagaacctcttccgagctgtggtgctgcgtccagacctgtcctgtttgtgg
aagctgttgggagacgcttgcaccgcagtcagctccgtgtcgtcaaacagagcccaggtt
ctagtgcccgccctgctggctggtttagacaccaacacccagagccacgcactgaaccag
gcccagacactcaaagttggtgagaggtgttatgtccgtgctttgaagctgatgtctgaa
gttcccaccctttggtatgacctagggctcaactattaccgccagtccagcgtacccaga
cctgatgatgtagaccagaactcccaatctctgctcctagtgaaggcccagcagtgttta
aaaaaggctattatgatggacagtgggacccatagctactggaatgccctgggagtgatt
tctatgagcaaaggtcttgagaacttcgctttggcgcaacattgcttcatcaagtccata
caagttgagccaaataatgttgttgcttggaccaaccttggtaccctttatttgaaaaag
gacaatatagagcttgcacacgaggccttcaagattgcccagtcgctggagccgctttat
gtcaactgctggatcggacaggcgctgatagcagagagagtgggaagctatgacaccatg
gatcttttcaggcacaccactgaactcagcacacatatggagggagtgaaaggttatacc
ttctgggtatgctccaccctgcttgataagagcaacagagactcagaactatatcgctac
aacatagtccagatgaacgccatctctgctgctcaggtggcactcagcaagtacacagag
aggatccagtctgaccctgatgccttcattatgcttggctacatgaatgagcatctgcag
ctgaagaggcaggccatacaggcttacaaaagagctgttgaactgcttcagtccatgtcc
tcgacagaacaactgacttttgctttgtgtagctatggccgtgctttgtgcacctcaggc
cagtcagaggaggcggtgcgtgtttataattccactccactgcaggacctcagtgatctg
gctgggctggctctggcctactgcagggccggactcatcccagagagcattagcgcctat
gaacgtgccttggctgtggcttccattgagaaggaaaaggcttacatcttgaccgctgtg
gcgctgcttcaacaccggcagggtaacctagactcagctaagaccctgctgtttaaatgc
tcgatgttaaaggagccaatcgcagagtccctgctgtgtttaagtgccctgggattggtc
cacagtgatgctacactagctgctgctgccctggcggagcttttgaaacagggtccagcc
tcagggaaagttaccgagcaacggtgtctgctcacctgcgccttgctcgccctgcagggc
aactacagcgcggtgcaaagagaggcttccagagctgtacacagcaatcctggaaaccca
tctctgtgggccctgttgtccaggctgataccacaatactaccccagaaaggcaaatggc
ggagcgatggctggtcatgttgcctgtctctccagtatgacccaaggaaagagggcgctg
ctgtacagtggagtaaaccagctggctagtgggagacactctgaagagaacagtcacaga
aatgccctgaagactatgcagagagctgtgctgctctgtcctgatgatccggcaacctgg
gcgggattgatggctgcctgtcacacagaaaacacttcctgttatctttcaggttccgct
ccttgcagacgaggactggagcaaaccctcatgtcagtggtttctgagaaagtgcataat
gtggaagagatagagcgccctctagcccagactctaaaaggctgggtgctacagcaggca
gtctctggtctcacgctggggggacagctggagcaggcagaagctctctgcacacaggtg
ctgaatgtttctcccgaacacccggcagtgatgctgtccctgagacaggtgcagtgtcag
cgcctccttttggccggtggtggtactgccctcccagactccgtactggagcaactaaac
aacacagtgatgatgaaccccaccaaccttggggcgtggcattggctggcggaggtgtat
cgtagccagggcctgctggtccaggcagtcctggcttacaggcagagtctgcagctagcc
tcacagctcggcctgcacagcagccaggtagccaccctgctgcggctagccctgctagcc
ctcgaaccctgtctggcgggggtcccaagaaaggactggacggacatgatactagaagcc
accactgaagtcttgaagctgggttcgtcccctatggccctcctcttccaggccctgctc
cagtatgtgaccaagatggctgctagggaaacaaggcgtttgttggagagactggcgtac
tctcaagacttcccagtgacagtggtgcaggttgccagctggtacctcctcagacacttg
catgccaaaaacgaccaggagctaatcaatgtccttttgcaacatgccaaaatgaatgga
gaccaaagactgctggagtttcattcactgcttgcctcttcttcaacctga
DBGET
integrated database retrieval system
