Perca flavescens (yellow perch): 114557014
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Entry
114557014 CDS
T07494
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
114557014
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pflv04040
]
114557014
Ion channels [BR:
pflv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
114557014
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
114557014
NCBI-ProteinID:
XP_028436069
LinkDB
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Position
1:complement(42960468..42976602)
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AA seq
720 aa
AA seq
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MHCGSALLRHELPANHAAGSCGRGVGEAPVLKVEDVDRDVAQQKQAVNIPRIITSTEPEC
SHLTVQLSKLRAADEEADNLKTWSSQGNLQTADSEVRPLSAASVGSVAVQERLSELVQLF
KGRLELRRDRLVDPDESEEESPSASPSKAPPPPPPPEEKKDDVPAAEEGKEEEEEKELML
PFEILGRPVVIPRLPKLPKLPPMPDWLRAIVEYRFPSSIDPFTDLIYVMWLFCVVAAWNW
NVWLIPVRWAFPYQTPENLHLWLLMDYTCDFIYILDILVFQPRLQFVRGGDIVCDKKDMR
DNYMTTERFKMDIISLFPMEIFYFFTGVNSLLRFPRLLKYMAFFEFNDRMEAVMKKAYIY
RVIRTSSYLLYSLHINACLFYWGSDYEGLGSTKWVYNGKGNAYIRCYYFAVKTLITIGGL
PDPTTVFEICFQLINYFVGVFAFSIMIGQMRDVVGAATAGENYYRACMDSTIKYMNNYHI
PRDVQNRIKTWYDYTWKSQGMLDEQELLVQLPTKMRLDMAVDVNYSIISKVALFQGCDRQ
MVFDMLTRLKSVVYLPGDFVCKKGEIGREMYIIKQGEVQVVGGPDLQTVFVTIRAGSVFG
EISLLAGGGGNRRTANVKAHGFANLFILDKKDLAEILVHYPESQKLLRKKAKTMLTKDKK
PDEKGAAAVAMQVIPPRPDTPEMFKAALKVAQQEGIEGVFSKLMKSYEASEVRQKSMLLR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcggctctgccctgcttcgccacgagctgccagctaaccacgctgcagggagt
tgtgggcgaggtgtgggtgaagctccggtgctgaaggtggaggatgtggatcgggacgtg
gcgcagcaaaaacaagccgtgaacattcccagaattatcaccagcacagaaccagagtgc
agccacctgacagtccagctgtcaaagctcagagctgcagatgaggaagcagataatctg
aagacctggtccagtcagggaaacctgcagactgcagacagcgaggtgcgtcctctgtct
gcagccagtgtcggcagcgtggcggtccaggagcgtctgagcgagcttgtccagctgttt
aaaggccgattagagctgcggagagaccgactggtggacccggacgagtctgaggaagaa
agtccttcagcctccccgagcaaggctccacctcctcctcctcctccagaagagaagaag
gacgacgtgcctgcagcagaagaaggaaaggaagaggaggaagagaaggaactcatgctc
ccctttgaaattttgggacgtccagtcgtaattcccagactgcccaaactgcccaaactt
cccccgatgcccgactggctccgagccatcgtggagtaccgcttcccctctagcatcgac
cctttcaccgatctgatctacgtgatgtggctgttctgtgtcgtggcggcgtggaactgg
aacgtgtggttgatcccagtccgctgggcgttcccctaccaaacccccgaaaacctccac
ctgtggctgctgatggactacacctgcgacttcatctacatcctcgacatcctcgtcttc
cagccccgactgcagttcgtccgcggaggagacatagtgtgtgataaaaaggacatgaga
gacaactacatgaccaccgaaagatttaagatggacatcatcagtctgtttcccatggag
atattttactttttcaccggagtgaactctctgctgagatttcctcgtctgctgaaatac
atggctttctttgagttcaacgacagaatggaagctgtgatgaagaaagcgtacatctac
agggtgatccgaacatcctcctacctgctgtactctctgcacatcaacgcctgtctcttc
tactggggctcagactacgaaggactgggatccaccaagtgggtctacaatggaaagggc
aacgcttatatccgctgttactattttgcggtgaagacactgatcaccatcggaggactg
ccagaccccaccaccgtctttgagatctgcttccagctcatcaactacttcgttggcgtc
tttgcgttctctatcatgattggtcagatgagagacgtggtcggtgctgcgaccgccggt
gagaactattaccgtgcctgcatggacagcaccatcaagtacatgaacaactaccacatc
ccccgggacgtccagaaccgcatcaagacttggtacgactacacctggaagagccagggc
atgctggatgagcaggagctgctggtgcaacttcctaccaagatgaggctggacatggcc
gtggacgtcaactacagcatcatcagtaaagtcgctttgtttcagggctgtgacagacag
atggtgttcgacatgctgacaaggctcaaatctgtggtctacctgcccggagactttgtc
tgtaaaaagggggagatcggcagggagatgtacatcattaagcagggggaggtccaggtg
gttggtggtcccgacctgcagacagtcttcgtcaccatcagagccggctcggtgttcgga
gagatcagtttgctggcgggaggcggagggaaccgacgtacagccaacgtgaaggcgcac
ggattcgccaacctcttcattctggataagaaggacctggcagagatcttggtgcactac
ccagagtcccagaaactcctccgcaagaaggccaagacgatgttgacaaaggacaagaag
ccggatgagaagggtgcggctgcagtggcgatgcaggtcatcccgcccagaccggacacc
cccgagatgttcaaggcggcgctgaaggtggcgcagcaggaaggaatagagggcgtcttc
tccaaactgatgaaaagctacgaagcatctgaggtgagacagaagtccatgctgctccgc
tga
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