Perca flavescens (yellow perch): 114558280
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Entry
114558280 CDS
T07494
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04110
Cell cycle
pflv04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114558280 (smc1a)
04114 Oocyte meiosis
114558280 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114558280 (smc1a)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114558280 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
114558280 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
114558280
NCBI-ProteinID:
XP_028437942
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Position
7:complement(19749306..19763216)
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AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRVIIGSSSEYRINNKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYERRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKGDMDELDKEMKAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEMAKRRIDEINTELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFIEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHDMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLHSGTMDDISQGEGSSQTE
ESSSQRTSSSVLAKEALIEIDYSNLSEDLKDVLSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNNCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVLNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaactgatagagatcgaaaacttcaagtcgtataaaggaagacagatc
attggaccttttcataagtttactgcaatcatcggacccaatggatctggaaaatccaac
cttatggatgccatcagcttcgtgttggcggagaagaccagcaacctgcgtgtgaagact
ctgaaggatctaatccatggagcacctgtagggaaaccagctgccaacagagcctttgtc
agcatggtgtaccaggaggataacggagaggaacgctccttcacaagggtcattattggt
tcctcctctgagtaccgcatcaacaacaaggtggtgggcctgcctgaatacagtgaagag
ctggaaaaacttggcattttgatcaaggctaggaacttcctggtttttcagggagctgtg
gagtctattgccatgaagaaccccaaggagcggacagctctgtttgaggaaatctcacgt
tctggagagctggcccaggagtacgaacgcaggaagaaggaaatggtgaaagcagaggag
gacacgcagttcaattaccatcgtaagaaaaacattgctgctgagcgcaaagaagccaag
caagagaaggaggaggctgagcggtaccagcgtctgaaagacgaagtggccagggctagt
gttcagttgcagctcttcaagctgtaccacaatgagactgagattgagaagctgaataaa
gagctgggccagcggaacaaggagatcgataaggaccgtaaaaagatggaccatgtggag
gaggagctgaaggacaagaagaaggagcttggcaggctgatgagggagcagcagactatt
gagaaagaaatcaaagaaaaagactctgagttgaaccaaaagaggccgcagtacatcaag
gccaaagagaatacctcacacaagatcaagaagctcgaggcagcacgcaagtcactgcaa
aatgcccagaagatgtacaagaaacgcaagggggacatggatgagcttgataaagagatg
aaggcggtggagctggccaagcaagagtttgaggagcgcatggaggaggaggcgcaaagc
cagggccaagacctgaccctggaggaaaaccaggtcaagcagtaccatcgtctaaaggag
gaggccagtaaacgcgctgccaccctggcacaggagctggagaagttcaaccgcgaccag
aaggccgaccaggaccgcctggacttggaggagaggaagaaagtggagacagaggccaaa
atcaaacaaaagatccgtgaaattgaggaaaaccagaaacgcattgagaaattagaggat
tacattaccaccagcaggcagtcactggatgagcagaagcgcatggaggaggagctgact
gaggaggtggagatggccaagaggagaatcgatgagatcaacacggagcttaaccaggta
atggagcaactgggagacgccagaatcgacaggcaggagaacagtcgccagcagcgcaag
gctgagatcatggagagtatcaaaagactctatcctggctctgtgtatggtcgtctaatc
gacctgtgccagcccactcagaagaagtatcagattgctgtgaccaaagtgttgggcaaa
aacatggacgccatcattgttgactccgagaagactggcagagattgtattcaatacatc
aaggagcagagaggagagcctgagaccttccttcctctcgactacctagaggtgaaacca
acagatgagaaactgagggaactgcgaggagccaaactggtgattgatgtgattcgttat
gagcctcctcacatcaagaaagccctccagtatgcatgtggcaacgccctggtctgtgag
aacgtagaggatgcacgaaggattgctttcggagggccatacagacacaagacggtagcc
ctggacggtactctgttccagaagtctggagtcatctctggaggagccagtgacctgaag
gccaaggccaggcgctgggatgagaaggcagtggacaagcttaaggagaagaaagaaaaa
ctcactgaagagctcaaggagcaaatgaaggccaagaggaaggaggcagagctgcgtcag
gtgcagtctcaggcccacggtctgcagatgagactaaagtactcccagagtgatctggaa
cagacaaaaacccgtcacctctccctcaacatgcaggagaagtctaagctagagagtgaa
ttggcaaactttggccctcgcatcaacgacatcaagaggatcatccagtcccgtgagagg
gagatcaccgacctgcgagaccgcatgaacctggtggaggatgaggtgttcattgagttc
tgtaaggagattggagtgaggaacatcagagagtttgaagaggagaaggtgaagaggcag
aatgagattgcaaagaagcgtctagagtttgagacccagaagacccgcctgggtatccag
gtagactatgagaagaatcagctgaaggaagaccaggagaaagtcatgatgtgggagcag
accgtcaagaaggatgaggctgaaatagagcgactaaagaaggaggagcacagacacatg
aagatcattgatgagacaatggcccaactgcaggacctgaagaaccagcacctcaccaag
aaatctgaagtcaatgataagaaccatgatatggaggagatccgcaaaaaactgggtggc
gccaacaaggagttgactcagctccagaaggaggttacagccattgagaccaaactggag
cagaagcgcagtgatcgtcacaacttgctacaagcctgcaaaatgcaggacatcaggtta
cctcttcattctggaacaatggatgatatcagccagggagaggggagctcccagacagag
gagtccagcagccagaggacgtccagcagtgttctcgctaaagaggctctcatagagatc
gactacagcaacctgtctgaagaccttaaggatgtactgtcggaggaagagatcaaggcg
gagacgaacacgctgcagcagcgtctgaacgagcagcagagtatcctacagaggatcagc
gcacccaacatgaaggccatggagaaactcgagagtgtcagggacaagttccaagagacc
agtgatgagtttgaggctgctcgtaaaagagccaagaaggccaagcaagcctttgagcag
atcaagaaggaaaggtttgatcgtttcaataattgttttgagtctgtggccaccaacatt
gatgagatctacaaggccctgtcacgcaacagcagtgcccaggctttcctgggcccagaa
aacccagaggagccatacctggatggcatcaactataactgtgtggctccaggaaagagg
ttcagacccatggacaacctgtctggaggagagaagaccgttgctgccctggctctgctc
tttgctattcacagctacaaacctgctcccttctttgtcctggatgagattgacgctgct
ctggacaacactaacattggcaaggtggccaattacatcaaagaccagtcggtgctgaac
ttccaggccatcgtcatttctctgaaggaggaattctacaccaaggctgactcgctcatc
ggtgtttatccagagcaaggagattgtgtcatcagcaaagtgcttacttttgacctctcc
cagtatcccgatgccaacccaaatccaaatgaatag
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